RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 NKPD1Q17RQ9 610 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 C16orf46Q6P387 395 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 ZNF605Q86T29 641 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 NPAS4Q8IUM7 802 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 MYLIPQ8WY64 445 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 MRIQ9BWK5 157 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 SAP130Q9H0E3 1048 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 SLITRK6Q9H5Y7 841 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 ATP13A1Q9HD20 1204 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 MYOCOSA0A1B0GUC4 107 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 METTL12A8MUP2 240 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 HCLS1P14317 486 aaPredicted RBP3.09□□□□□ -1.91
LMBR1-222ENST00000638959 AFF3P51826 1226 aaKnown RBP3.09□□□□□ -1.91
LMBR1-222ENST00000638959 PCDH1Q08174 1060 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 FKBP5Q13451 457 aaPredicted RBP3.09□□□□□ -1.91
LMBR1-222ENST00000638959 TTC6Q86TZ1 520 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 ANKMY2Q8IV38 441 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 SYT8Q8NBV8 401 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 ADAMTS19Q8TE59 1207 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 FANCD2OSQ96PS1 177 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 ALPK1Q96QP1 1244 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 BHLHE41Q9C0J9 482 aaPredicted RBP3.09□□□□□ -1.91
LMBR1-222ENST00000638959 SCAND2PQ9GZW5 306 aaPredicted RBP3.09□□□□□ -1.91
LMBR1-222ENST00000638959 SLAMF8Q9P0V8 285 aa3.09□□□□□ -1.91
LMBR1-222ENST00000638959 USP17L15C9J2P7 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L10C9JJH3 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L13C9JLJ4 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L12C9JPN9 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L11C9JVI0 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L21D6R901 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L18D6R9N7 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L22D6RA61 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L17D6RBQ6 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L19D6RCP7 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L20D6RJB6 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 K7ESM1 405 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 ERVFC1P60507 584 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 ID3Q02535 119 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 USP17L24Q0WX57 530 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 TTLL4Q14679 1199 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 NEUROD2Q15784 382 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 PMEPA1Q969W9 287 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 NUDT16Q96DE0 195 aaKnown RBP3.08□□□□□ -1.92
LMBR1-222ENST00000638959 SGPP1Q9BX95 441 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 PCOLCE2Q9UKZ9 415 aa3.08□□□□□ -1.92
LMBR1-222ENST00000638959 TEX51A0A1B0GUA7 166 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 SLC22A31A6NKX4 558 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 IGF2BP3O00425 579 aaKnown RBP eCLIP3.07□□□□□ -1.92
LMBR1-222ENST00000638959 TNFRSF10BO14763 440 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 PEX10O60683 326 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 EDN3P14138 238 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 TGM1P22735 817 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 GDF5P43026 501 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 VMACQ2NL98 169 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 FRMD5Q7Z6J6 570 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 DDX54Q8TDD1 881 aaKnown RBP3.07□□□□□ -1.92
LMBR1-222ENST00000638959 TRIM56Q9BRZ2 755 aaKnown RBP3.07□□□□□ -1.92
LMBR1-222ENST00000638959 RNF32Q9H0A6 362 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 CLEC4MQ9H2X3 399 aaPredicted RBP3.07□□□□□ -1.92
LMBR1-222ENST00000638959 GCM1Q9NP62 436 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 SSU72Q9NP77 194 aaKnown RBP3.07□□□□□ -1.92
LMBR1-222ENST00000638959 COG6Q9Y2V7 657 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 SYNGAP1Q96PV0 1343 aa3.07□□□□□ -1.92
LMBR1-222ENST00000638959 POM121CA8CG34 1229 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 LIG1P18858 919 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 HK2P52789 917 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 RTP5Q14D33 572 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 ZNF423Q2M1K9 1284 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 IRF2BP1Q8IU81 584 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 PANK1Q8TE04 598 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 HSPA12BQ96MM6 686 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 SLC6A17Q9H1V8 727 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 CHRDQ9H2X0 955 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 IRAK3Q9Y616 596 aa3.06□□□□□ -1.92
LMBR1-222ENST00000638959 FAM196BA6NMK8 535 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 EREGO14944 169 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 SLPIP03973 132 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 SLFN14P0C7P3 912 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 HDGFL1Q5TGJ6 251 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 CDKAL1Q5VV42 579 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 FAM214BQ7L5A3 538 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.05□□□□□ -1.92
LMBR1-222ENST00000638959 ABTB2Q8N961 1025 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 DACT3Q96B18 629 aaPredicted RBP3.05□□□□□ -1.92
LMBR1-222ENST00000638959 FOXQ1Q9C009 403 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 DISC1Q9NRI5 854 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 TMEM59LQ9UK28 342 aa3.05□□□□□ -1.92
LMBR1-222ENST00000638959 DNAJC25-GNG10A0A024R161 153 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 A0A096LPE4 126 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 A0A1W2PPZ6 126 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 A6NHS1 94 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 FAM155AB1AL88 458 aaPredicted RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 H3BS24 57 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 ZBTB39O15060 712 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 PRICKLE3O43900 615 aaPredicted RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 HPXP02790 462 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 RPLP1P05386 114 aaKnown RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 C6P13671 934 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 TRHRP34981 398 aaPredicted RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 MAGEA10P43363 369 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms