RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNIP1-204ENST00000638725 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
SNIP1-204ENST00000638725 TRIM29Q14134 588 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 TOGARAM2Q6ZUX3 1019 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 TRMT44Q8IYL2 757 aaKnown RBP12.53□□□□□ -0.4
SNIP1-204ENST00000638725 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNIP1-204ENST00000638725 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
SNIP1-204ENST00000638725 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 CASQ1P31415 396 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 TC2NQ8N9U0 490 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 MPHOSPH8Q99549 860 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 SLC26A6Q9BXS9 759 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
SNIP1-204ENST00000638725 RIC1Q4ADV7 1423 aa12.53□□□□□ -0.4
SNIP1-204ENST00000638725 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.4
SNIP1-204ENST00000638725 SASH3O75995 380 aa12.52□□□□□ -0.4
SNIP1-204ENST00000638725 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.4
SNIP1-204ENST00000638725 TEX35Q5T0J7 233 aa12.52□□□□□ -0.4
SNIP1-204ENST00000638725 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.4
SNIP1-204ENST00000638725 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.4
SNIP1-204ENST00000638725 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.4
SNIP1-204ENST00000638725 NFE2L3Q9Y4A8 694 aa12.52□□□□□ -0.4
SNIP1-204ENST00000638725 ABCC12Q96J65 1359 aa12.52□□□□□ -0.4
SNIP1-204ENST00000638725 MYO1BO43795 1136 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 PPP2R3AQ06190 1150 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.41
SNIP1-204ENST00000638725 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 METTL24Q5JXM2 366 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-204ENST00000638725 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 TBC1D8O95759 1140 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 CDK11BP21127 795 aaKnown RBP12.52□□□□□ -0.41
SNIP1-204ENST00000638725 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 POSTNQ15063 836 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.41
SNIP1-204ENST00000638725 GRAMD1CQ8IYS0 662 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 MRFAP1Q9Y605 127 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.41
SNIP1-204ENST00000638725 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 ZNF532Q9HCE3 1301 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 STX10O60499 249 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 TPM1P09493 284 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 KARSQ15046 597 aaKnown RBP12.51□□□□□ -0.41
SNIP1-204ENST00000638725 TMEM67Q5HYA8 995 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
SNIP1-204ENST00000638725 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
SNIP1-204ENST00000638725 ZNF18P17022 549 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 GUCY1A2P33402 732 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
SNIP1-204ENST00000638725 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 KCNJ14Q9UNX9 436 aa12.51□□□□□ -0.41
SNIP1-204ENST00000638725 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 SSRP1Q08945 709 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 MTF1Q14872 753 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 DHX58Q96C10 678 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 MED15Q96RN5 788 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 ZCCHC17Q9NP64 241 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 SAMSN1Q9NSI8 373 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 MYO5AQ9Y4I1 1855 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 UBR2Q8IWV8 1755 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 ATRNO75882 1429 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 CSF1RP07333 972 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 HNRNPH2P55795 449 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 LDHAL6AQ6ZMR3 332 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 NEK11Q8NG66 645 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 FBXO2Q9UK22 296 aaPredicted RBP12.5□□□□□ -0.41
SNIP1-204ENST00000638725 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
SNIP1-204ENST00000638725 PDE6AP16499 860 aa12.49□□□□□ -0.41
SNIP1-204ENST00000638725 OAS2P29728 719 aaKnown RBP12.49□□□□□ -0.41
SNIP1-204ENST00000638725 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
SNIP1-204ENST00000638725 DIS3L2Q8IYB7 885 aaKnown RBP12.49□□□□□ -0.41
SNIP1-204ENST00000638725 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
SNIP1-204ENST00000638725 ENOX1Q8TC92 643 aaKnown RBP12.49□□□□□ -0.41
SNIP1-204ENST00000638725 SMARCE1Q969G3 411 aa12.49□□□□□ -0.41
SNIP1-204ENST00000638725 PARD6BQ9BYG5 372 aa12.49□□□□□ -0.41
SNIP1-204ENST00000638725 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms