RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PPARAQ07869 468 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 AKNAD1Q5T1N1 836 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 RBM46Q8TBY0 533 aaKnown RBP18.15■□□□□ 0.5
CLN6-219ENST00000637329 TEKT1Q969V4 418 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 KRT23Q9C075 422 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 TTF2Q9UNY4 1162 aaKnown RBP18.15■□□□□ 0.5
CLN6-219ENST00000637329 DAGLAQ9Y4D2 1042 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 TOB2Q14106 344 aaPredicted RBP18.14■□□□□ 0.49
CLN6-219ENST00000637329 AMOTL1Q8IY63 956 aa18.14■□□□□ 0.49
CLN6-219ENST00000637329 NIM1KQ8IY84 436 aa18.14■□□□□ 0.49
CLN6-219ENST00000637329 SH3RF3Q8TEJ3 882 aaPredicted RBP18.14■□□□□ 0.49
CLN6-219ENST00000637329 MTA3Q9BTC8 594 aa18.14■□□□□ 0.49
CLN6-219ENST00000637329 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.49
CLN6-219ENST00000637329 ZNF277Q9NRM2 450 aaPredicted RBP18.14■□□□□ 0.49
CLN6-219ENST00000637329 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.49
CLN6-219ENST00000637329 ADAMTSL1Q8N6G6 1762 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 USP5P45974 858 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 FSTL1Q12841 308 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 SLKQ9H2G2 1235 aaPredicted RBP18.13■□□□□ 0.49
CLN6-219ENST00000637329 SERPINA10Q9UK55 444 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 NEDD4P46934 1319 aa18.13■□□□□ 0.49
CLN6-219ENST00000637329 ECM29Q5VYK3 1845 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 BAZ2AQ9UIF9 1905 aaKnown RBP18.12■□□□□ 0.49
CLN6-219ENST00000637329 NFKBIEO00221 500 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 SLC3A2P08195 630 aaKnown RBP18.12■□□□□ 0.49
CLN6-219ENST00000637329 RHBDL3P58872 404 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 FGD1P98174 961 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 CTR9Q6PD62 1173 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 Q6ZUG5 572 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 NOL8Q76FK4 1167 aaKnown RBP18.12■□□□□ 0.49
CLN6-219ENST00000637329 TEX11Q8IYF3 940 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 ZDHHC15Q96MV8 337 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 BCS1LQ9Y276 419 aa18.12■□□□□ 0.49
CLN6-219ENST00000637329 PRC1O43663 620 aa18.11■□□□□ 0.49
CLN6-219ENST00000637329 FGRP09769 529 aa18.11■□□□□ 0.49
CLN6-219ENST00000637329 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
CLN6-219ENST00000637329 RSBN1LQ6PCB5 846 aaPredicted RBP18.11■□□□□ 0.49
CLN6-219ENST00000637329 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
CLN6-219ENST00000637329 TMEM87BQ96K49 555 aa18.11■□□□□ 0.49
CLN6-219ENST00000637329 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.11■□□□□ 0.49
CLN6-219ENST00000637329 WDR90Q96KV7 1748 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 FLT1P17948 1338 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 USP17L12C9JPN9 530 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 USP17L21D6R901 530 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 ORC4O43929 436 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
CLN6-219ENST00000637329 CRKP46108 304 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 MMP14P50281 582 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 EVCP57679 992 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 ANTXR2P58335 489 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 CTDSPL2Q05D32 466 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
CLN6-219ENST00000637329 F8W031 263 aaPredicted RBP18.09■□□□□ 0.49
CLN6-219ENST00000637329 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 ESR2Q92731 530 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 BRF1Q92994 677 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 MXD3Q9BW11 206 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 KCNQ5Q9NR82 932 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 MCM9Q9NXL9 1143 aa18.09■□□□□ 0.49
CLN6-219ENST00000637329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.09■□□□□ 0.497e-6■■■■■ 33.6
CLN6-219ENST00000637329 COL2A1P02458 1487 aaPredicted RBP18.08■□□□□ 0.49
CLN6-219ENST00000637329 MINDY4BA8MYZ0 360 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 B4E1Z4 1266 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 LARGE1O95461 756 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 PDE4BQ07343 736 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 SART3Q15020 963 aaKnown RBP18.08■□□□□ 0.48
CLN6-219ENST00000637329 ME3Q16798 604 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 C12orf60Q5U649 245 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 KIAA0825Q8IV33 1275 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 AGBL3Q8NEM8 1001 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
CLN6-219ENST00000637329 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 TAOK2Q9UL54 1235 aa18.08■□□□□ 0.48
CLN6-219ENST00000637329 ANGEL1Q9UNK9 670 aaKnown RBP18.08■□□□□ 0.48
CLN6-219ENST00000637329 SH2B2O14492 632 aaPredicted RBP18.07■□□□□ 0.48
CLN6-219ENST00000637329 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
CLN6-219ENST00000637329 SCNN1DP51172 638 aa18.07■□□□□ 0.48
CLN6-219ENST00000637329 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
CLN6-219ENST00000637329 ARHGAP27Q6ZUM4 889 aa18.07■□□□□ 0.48
CLN6-219ENST00000637329 GTF3C6Q969F1 213 aa18.07■□□□□ 0.48
CLN6-219ENST00000637329 GMLQ99445 158 aa18.07■□□□□ 0.48
CLN6-219ENST00000637329 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
CLN6-219ENST00000637329 HDAC9Q9UKV0 1011 aa18.07■□□□□ 0.48
CLN6-219ENST00000637329 PSMD14O00487 310 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 KDM4AO75164 1064 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 SLC34A2O95436 690 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 HTRA3P83110 453 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 CYB5R4Q7L1T6 521 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 SGMS1Q86VZ5 419 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 MAPKAPK5Q8IW41 473 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 TACC3Q9Y6A5 838 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 MYH1P12882 1939 aa18.06■□□□□ 0.48
CLN6-219ENST00000637329 NID2Q14112 1375 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 373.1 ms