RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 HAUS7Q99871 368 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 RNF186Q9NXI6 227 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 LRP2BPQ9P2M1 347 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
DDX41-219ENST00000629036 ENTPD3O75355 529 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 CHGBP05060 677 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 SLURP2P0DP57 97 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 NF2P35240 595 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 TNNI2P48788 182 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 ZNF157P51786 506 aaPredicted RBP13.55□□□□□ -0.24
DDX41-219ENST00000629036 GSTO1P78417 241 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 MAP3K10Q02779 954 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 SUPT20HL1Q3ZLR7 823 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 TSHZ3Q63HK5 1081 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
DDX41-219ENST00000629036 CTU1Q7Z7A3 348 aaKnown RBP13.55□□□□□ -0.24
DDX41-219ENST00000629036 SLF2Q8IX21 1173 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 SAGE1Q9NXZ1 904 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 LOC285556D6RIA3 1793 aa13.55□□□□□ -0.24
DDX41-219ENST00000629036 DDTLA6NHG4 134 aaPredicted RBP13.54□□□□□ -0.24
DDX41-219ENST00000629036 IGHDP01880 384 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 TCP10Q12799 353 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 ARMC9Q7Z3E5 817 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 PI4K2BQ8TCG2 481 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
DDX41-219ENST00000629036 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
DDX41-219ENST00000629036 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 ZNF112Q9UJU3 913 aa13.54□□□□□ -0.24
DDX41-219ENST00000629036 UNCXA6NJT0 531 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 GOLIM4O00461 696 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 MAP4K4O95819 1239 aaPredicted RBP13.53□□□□□ -0.24
DDX41-219ENST00000629036 LDHCP07864 332 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 PDE6AP16499 860 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 DYNLL1P63167 89 aaKnown RBP13.53□□□□□ -0.24
DDX41-219ENST00000629036 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 SPRYD7Q5W111 196 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 MAGEB6Q8N7X4 407 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 AATFQ9NY61 560 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX41-219ENST00000629036 SNCAIPQ9Y6H5 919 aa13.53□□□□□ -0.24
DDX41-219ENST00000629036 PHF20L1A8MW92 1017 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 IDH1O75874 414 aaKnown RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 CYP7A1P22680 504 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 VGLL4Q14135 290 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 TTLL12Q14166 644 aaPredicted RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 TMED8Q6PL24 325 aaPredicted RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 WNK4Q96J92 1243 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 FLT1P17948 1338 aa13.52□□□□□ -0.25
DDX41-219ENST00000629036 GREB1LQ9C091 1923 aaPredicted RBP13.52□□□□□ -0.25
DDX41-219ENST00000629036 MKI67P46013 3256 aaKnown RBP13.51□□□□□ -0.25
DDX41-219ENST00000629036 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
DDX41-219ENST00000629036 CSRNP1Q96S65 589 aa13.51□□□□□ -0.25
DDX41-219ENST00000629036 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 ZNF532Q9HCE3 1301 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 INPP5BP32019 993 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 ADD2P35612 726 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
DDX41-219ENST00000629036 MAP3K12Q12852 859 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 PICALMQ13492 652 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
DDX41-219ENST00000629036 MIGA2Q7L4E1 593 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
DDX41-219ENST00000629036 TEX11Q8IYF3 940 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 STAP2Q9UGK3 403 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 ZSWIM8A7E2V4 1837 aa13.5□□□□□ -0.25
DDX41-219ENST00000629036 SPDYE5A6NIY4 337 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
DDX41-219ENST00000629036 TM4SF4P48230 202 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 RRP1BQ14684 758 aaKnown RBP13.49□□□□□ -0.25
DDX41-219ENST00000629036 NOL9Q5SY16 702 aaKnown RBP13.49□□□□□ -0.25
DDX41-219ENST00000629036 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
DDX41-219ENST00000629036 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 WRNIP1Q96S55 665 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 ZNF341Q9BYN7 854 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 CENPFP49454 3210 aa13.49□□□□□ -0.25
DDX41-219ENST00000629036 PLCG2P16885 1265 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 MX1P20591 662 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 SLC9C2Q5TAH2 1124 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 DCAF15Q66K64 600 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 LCORLQ8N3X6 602 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 TGFBRAP1Q8WUH2 860 aa13.48□□□□□ -0.25
DDX41-219ENST00000629036 ELP3Q9H9T3 547 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms