RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 CHGBP05060 677 aa16.47■□□□□ 0.23
SOX2-OT-248ENST00000628496 ZNF157P51786 506 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-248ENST00000628496 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
SOX2-OT-248ENST00000628496 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-248ENST00000628496 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
SOX2-OT-248ENST00000628496 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
SOX2-OT-248ENST00000628496 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 SLC10A3P09131 477 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 PLCG2P16885 1265 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 RASAL3Q86YV0 1011 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 ATRNL1Q5VV63 1379 aa16.46■□□□□ 0.23
SOX2-OT-248ENST00000628496 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 ERC2O15083 957 aa16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 ADD2P35612 726 aa16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 PDE1AP54750 535 aa16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 MYO5AQ9Y4I1 1855 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-248ENST00000628496 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 TGFBRAP1Q8WUH2 860 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 CSRNP1Q96S65 589 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 FLT1P17948 1338 aa16.44■□□□□ 0.22
SOX2-OT-248ENST00000628496 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 SLURP2P0DP57 97 aa16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 NOGQ13253 232 aa16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 DCAF15Q66K64 600 aa16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 MAPKAPK5Q8IW41 473 aa16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-248ENST00000628496 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 MAP2K2P36507 400 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 VGLL4Q14135 290 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 UBE3CQ15386 1083 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 PLEKHM2Q8IWE5 1019 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
SOX2-OT-248ENST00000628496 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZSCAN25Q6NSZ9 544 aa16.41■□□□□ 0.22
SOX2-OT-248ENST00000628496 SLC10A4Q96EP9 437 aa16.41■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZNF341Q9BYN7 854 aa16.41■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZNF112Q9UJU3 913 aa16.41■□□□□ 0.22
SOX2-OT-248ENST00000628496 MBD4O95243 580 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 PDE4AP27815 886 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 INPP5BP32019 993 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 GJA5P36382 358 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 SPRYD7Q5W111 196 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 ELP3Q9H9T3 547 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 WBP1LQ9NX94 342 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
SOX2-OT-248ENST00000628496 OTOFQ9HC10 1997 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 PHF20L1A8MW92 1017 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 RNF113AO15541 343 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 USP5P45974 858 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
SOX2-OT-248ENST00000628496 MAP2K1Q02750 393 aaPredicted RBP16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 CSADQ9Y600 493 aa16.38■□□□□ 0.21
SOX2-OT-248ENST00000628496 PRKAB2O43741 272 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 TBC1D12O60347 775 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 SLC4A8Q2Y0W8 1093 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 APPBP2Q92624 585 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
SOX2-OT-248ENST00000628496 M0R2C6 588 aa16.36■□□□□ 0.21
SOX2-OT-248ENST00000628496 NOL9Q5SY16 702 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms