RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 PLCG2P16885 1265 aa16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 RASAL3Q86YV0 1011 aa16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 ATRNL1Q5VV63 1379 aa16.46■□□□□ 0.23
SOX2-OT-246ENST00000628343 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 ERC2O15083 957 aa16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 ADD2P35612 726 aa16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 PDE1AP54750 535 aa16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 MYO5AQ9Y4I1 1855 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-246ENST00000628343 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 TGFBRAP1Q8WUH2 860 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 CSRNP1Q96S65 589 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 FLT1P17948 1338 aa16.44■□□□□ 0.22
SOX2-OT-246ENST00000628343 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 SLURP2P0DP57 97 aa16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 NOGQ13253 232 aa16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 DCAF15Q66K64 600 aa16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 MAPKAPK5Q8IW41 473 aa16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-246ENST00000628343 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 MAP2K2P36507 400 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 VGLL4Q14135 290 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 UBE3CQ15386 1083 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 PLEKHM2Q8IWE5 1019 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
SOX2-OT-246ENST00000628343 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZSCAN25Q6NSZ9 544 aa16.41■□□□□ 0.22
SOX2-OT-246ENST00000628343 SLC10A4Q96EP9 437 aa16.41■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZNF341Q9BYN7 854 aa16.41■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZNF112Q9UJU3 913 aa16.41■□□□□ 0.22
SOX2-OT-246ENST00000628343 MBD4O95243 580 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 PDE4AP27815 886 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 INPP5BP32019 993 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 GJA5P36382 358 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 SPRYD7Q5W111 196 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 ELP3Q9H9T3 547 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 WBP1LQ9NX94 342 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
SOX2-OT-246ENST00000628343 OTOFQ9HC10 1997 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 PHF20L1A8MW92 1017 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 RNF113AO15541 343 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 USP5P45974 858 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
SOX2-OT-246ENST00000628343 MAP2K1Q02750 393 aaPredicted RBP16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 CSADQ9Y600 493 aa16.38■□□□□ 0.21
SOX2-OT-246ENST00000628343 PRKAB2O43741 272 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 TBC1D12O60347 775 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 SLC4A8Q2Y0W8 1093 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 APPBP2Q92624 585 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
SOX2-OT-246ENST00000628343 M0R2C6 588 aa16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 NOL9Q5SY16 702 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 METTL16Q86W50 562 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
SOX2-OT-246ENST00000628343 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
SOX2-OT-246ENST00000628343 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
SOX2-OT-246ENST00000628343 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
SOX2-OT-246ENST00000628343 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms