RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 TLR2O60603 784 aa16.93■□□□□ 0.3
USH1C-211ENST00000624811 ENTPD3O75355 529 aa16.93■□□□□ 0.3
USH1C-211ENST00000624811 ZNF384Q8TF68 577 aa16.93■□□□□ 0.3
USH1C-211ENST00000624811 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
USH1C-211ENST00000624811 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
USH1C-211ENST00000624811 ATRNL1Q5VV63 1379 aa16.92■□□□□ 0.3
USH1C-211ENST00000624811 PHIPQ8WWQ0 1821 aa16.92■□□□□ 0.3
USH1C-211ENST00000624811 MYCP01106 439 aaPredicted RBP16.92■□□□□ 0.3
USH1C-211ENST00000624811 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
USH1C-211ENST00000624811 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
USH1C-211ENST00000624811 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
USH1C-211ENST00000624811 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
USH1C-211ENST00000624811 SNRKQ9NRH2 765 aa16.92■□□□□ 0.3
USH1C-211ENST00000624811 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
USH1C-211ENST00000624811 PTPRFP10586 1907 aa16.92■□□□□ 0.3
USH1C-211ENST00000624811 ATAD5Q96QE3 1844 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 PHF20L1A8MW92 1017 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 ZBTB22O15209 634 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 MCAMP43121 646 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
USH1C-211ENST00000624811 KIF22Q14807 665 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 ARHGEF6Q15052 776 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 ITPRIPQ8IWB1 547 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
USH1C-211ENST00000624811 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
USH1C-211ENST00000624811 ZCCHC17Q9NP64 241 aaKnown RBP16.91■□□□□ 0.3
USH1C-211ENST00000624811 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
USH1C-211ENST00000624811 MAST2Q6P0Q8 1798 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 GPR75-ASB3A0A0A6YYF3 556 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 FAM196BA6NMK8 535 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 RLBP1P12271 317 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 ARID4AP29374 1257 aaPredicted RBP16.9■□□□□ 0.3
USH1C-211ENST00000624811 RHBDL3P58872 404 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 MOGSQ13724 837 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 SLC9C1Q4G0N8 1177 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 ARMC5Q96C12 935 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 NSUN4Q96CB9 384 aaKnown RBP16.9■□□□□ 0.3
USH1C-211ENST00000624811 DBNDD2Q9BQY9 259 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 PICK1Q9NRD5 415 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 MGAMO43451 1857 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 CDK5RAP2Q96SN8 1893 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 CENPFP49454 3210 aa16.9■□□□□ 0.3
USH1C-211ENST00000624811 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
USH1C-211ENST00000624811 UQCRFS1P1P0C7P4 283 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 EN2P19622 333 aaPredicted RBP16.89■□□□□ 0.29
USH1C-211ENST00000624811 GSTO1P78417 241 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 POLA2Q14181 598 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 CCDC84Q86UT8 332 aaPredicted RBP16.89■□□□□ 0.29
USH1C-211ENST00000624811 SH3TC2Q8TF17 1288 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 LRP2BPQ9P2M1 347 aa16.89■□□□□ 0.29
USH1C-211ENST00000624811 LDHCP07864 332 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 CYP2C8P10632 490 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 PTPRAP18433 802 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 CTGFP29279 349 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 PRPF38BQ5VTL8 546 aaKnown RBP16.88■□□□□ 0.29
USH1C-211ENST00000624811 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 SSH3Q8TE77 659 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 ZNF333Q96JL9 665 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
USH1C-211ENST00000624811 CXCL11O14625 94 aa16.87■□□□□ 0.29
USH1C-211ENST00000624811 GPAT2Q6NUI2 795 aa16.87■□□□□ 0.29
USH1C-211ENST00000624811 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
USH1C-211ENST00000624811 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
USH1C-211ENST00000624811 TMEM106CQ9BVX2 250 aa16.87■□□□□ 0.29
USH1C-211ENST00000624811 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
USH1C-211ENST00000624811 TRIM75PA6NK02 468 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 SLC34A2O95436 690 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
USH1C-211ENST00000624811 PSMC4P43686 418 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 SLC4A8Q2Y0W8 1093 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 CCDC158Q5M9N0 1113 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
USH1C-211ENST00000624811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
USH1C-211ENST00000624811 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
USH1C-211ENST00000624811 ZBTB7BO15156 539 aaPredicted RBP16.85■□□□□ 0.29
USH1C-211ENST00000624811 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
USH1C-211ENST00000624811 MAP3K10Q02779 954 aa16.85■□□□□ 0.29
USH1C-211ENST00000624811 TRIM47Q96LD4 638 aa16.85■□□□□ 0.29
USH1C-211ENST00000624811 NOL10Q9BSC4 688 aaKnown RBP16.85■□□□□ 0.29
USH1C-211ENST00000624811 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
USH1C-211ENST00000624811 OSBPL5Q9H0X9 879 aaPredicted RBP16.85■□□□□ 0.29
USH1C-211ENST00000624811 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
USH1C-211ENST00000624811 AATFQ9NY61 560 aaKnown RBP eCLIP16.85■□□□□ 0.29
USH1C-211ENST00000624811 TLR7Q9NYK1 1049 aaKnown RBP16.85■□□□□ 0.29
USH1C-211ENST00000624811 A0A0G2JLL6 359 aaPredicted RBP16.84■□□□□ 0.29
USH1C-211ENST00000624811 OSBPP22059 807 aa16.84■□□□□ 0.29
USH1C-211ENST00000624811 NAA16Q6N069 864 aaPredicted RBP16.84■□□□□ 0.29
USH1C-211ENST00000624811 FASTKD5Q7L8L6 764 aaKnown RBP16.84■□□□□ 0.29
USH1C-211ENST00000624811 PRRT2Q7Z6L0 340 aaPredicted RBP16.84■□□□□ 0.29
USH1C-211ENST00000624811 PANK1Q8TE04 598 aa16.84■□□□□ 0.29
USH1C-211ENST00000624811 GNRH1P01148 92 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms