RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 RNF114Q9Y508 228 aa6.82□□□□□ -1.32
CDKL5-207ENST00000624700 SYNGAP1Q96PV0 1343 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 FBXO24O75426 580 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 BMP6P22004 513 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 LIG3P49916 1009 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 HDLBPQ00341 1268 aaKnown RBP6.81□□□□□ -1.32
CDKL5-207ENST00000624700 EXOSC6Q5RKV6 272 aaKnown RBP6.81□□□□□ -1.32
CDKL5-207ENST00000624700 NUTM2GQ5VZR2 741 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 HGSNATQ68CP4 663 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 MFSD14AQ96MC6 490 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 TGIF2Q9GZN2 237 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 ROBO2Q9HCK4 1378 aa6.81□□□□□ -1.32
CDKL5-207ENST00000624700 TRIM37O94972 964 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 GSTP1P09211 210 aaKnown RBP6.8□□□□□ -1.32
CDKL5-207ENST00000624700 SLFN14P0C7P3 912 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 MAOBP27338 520 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 ERCC5P28715 1186 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-207ENST00000624700 GBP2P32456 591 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-207ENST00000624700 PCNX4Q63HM2 1172 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 LLGL2Q6P1M3 1020 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 METTL16Q86W50 562 aaKnown RBP6.8□□□□□ -1.32
CDKL5-207ENST00000624700 NT5DC4Q86YG4 428 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-207ENST00000624700 SMG8Q8ND04 991 aaKnown RBP6.8□□□□□ -1.32
CDKL5-207ENST00000624700 TMPRSS13Q9BYE2 586 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 SUGCTQ9HAC7 445 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
CDKL5-207ENST00000624700 CELA3AP09093 270 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 RXRBP28702 533 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 HOXA10P31260 410 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-207ENST00000624700 LMNB2Q03252 620 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 SPATA32Q96LK8 384 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 TRIM56Q9BRZ2 755 aaKnown RBP6.79□□□□□ -1.32
CDKL5-207ENST00000624700 USP26Q9BXU7 913 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 CYP4F12Q9HCS2 524 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 ADGRE2Q9UHX3 823 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 DDX41Q9UJV9 622 aaKnown RBP6.79□□□□□ -1.32
CDKL5-207ENST00000624700 LEMD3Q9Y2U8 911 aa6.79□□□□□ -1.32
CDKL5-207ENST00000624700 LOC100289279A0A1B0GTE1 492 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 PAGE1O75459 146 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 TIAF1O95411 115 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 ZNF252P-AS1Q0IIN9 211 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 GNL2Q13823 731 aaKnown RBP6.78□□□□□ -1.32
CDKL5-207ENST00000624700 PDZD3Q86UT5 571 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 FBXL6Q8N531 539 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 PHC3Q8NDX5 983 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 KCNB2Q92953 911 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 NRSN2Q9GZP1 204 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 RAD18Q9NS91 495 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 KBTBD4Q9NVX7 518 aa6.78□□□□□ -1.32
CDKL5-207ENST00000624700 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-207ENST00000624700 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
CDKL5-207ENST00000624700 F13BP05160 661 aa6.77□□□□□ -1.33
CDKL5-207ENST00000624700 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
CDKL5-207ENST00000624700 CAMK2GQ13555 558 aaPredicted RBP6.77□□□□□ -1.33
CDKL5-207ENST00000624700 MAP3K11Q16584 847 aa6.77□□□□□ -1.33
CDKL5-207ENST00000624700 CPSF6Q16630 551 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDKL5-207ENST00000624700 OSBPL1AQ9BXW6 950 aa6.77□□□□□ -1.33
CDKL5-207ENST00000624700 CCSER2Q9H7U1 834 aa6.77□□□□□ -1.33
CDKL5-207ENST00000624700 SUPT16HQ9Y5B9 1047 aaKnown RBP6.77□□□□□ -1.33
CDKL5-207ENST00000624700 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 FAM95CA0A1B0GW59 222 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 FOSL1P15407 271 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 USP11P51784 963 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 PDE3AQ14432 1141 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 MAP1SQ66K74 1059 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-207ENST00000624700 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 VPS37DQ86XT2 251 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 KCNQ5Q9NR82 932 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 CACNA2D2Q9NY47 1150 aa6.76□□□□□ -1.33
CDKL5-207ENST00000624700 ANGEL1Q9UNK9 670 aaKnown RBP6.76□□□□□ -1.33
CDKL5-207ENST00000624700 DLGAP3O95886 979 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 PF4P02776 101 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
CDKL5-207ENST00000624700 MSMPQ1L6U9 139 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 SNAP47Q5SQN1 464 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 C9orf131Q5VYM1 1079 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 ABI1Q8IZP0 508 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 ZNF296Q8WUU4 475 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-207ENST00000624700 ACSBG1Q96GR2 724 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 RHOVQ96L33 236 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 SPON2Q9BUD6 331 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 COPRSQ9NQ92 184 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 TACC3Q9Y6A5 838 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 SNCAIPQ9Y6H5 919 aa6.75□□□□□ -1.33
CDKL5-207ENST00000624700 AOC2O75106 756 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 DRD2P14416 443 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 TFE3P19532 575 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-207ENST00000624700 NFKBIBQ15653 356 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 KIF4BQ2VIQ3 1234 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 HDXQ7Z353 690 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 KIAA0825Q8IV33 1275 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 GRIN3AQ8TCU5 1115 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 STK35Q8TDR2 534 aa6.74□□□□□ -1.33
CDKL5-207ENST00000624700 FBLIM1Q8WUP2 373 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms