RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 KRT2P35908 639 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 ME1P48163 572 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 LETM2Q2VYF4 491 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 MTERF2Q49AM1 385 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 CPLX3Q8WVH0 158 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 STAG1Q8WVM7 1258 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 GATAD2BQ8WXI9 593 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 CALR3Q96L12 384 aaKnown RBP3.88□□□□□ -1.79
ATRX-212ENST00000623706 FBXL5Q9UKA1 691 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 SCAF8Q9UPN6 1271 aaKnown RBP3.88□□□□□ -1.79
ATRX-212ENST00000623706 ASS1P00966 412 aaKnown RBP3.88□□□□□ -1.79
ATRX-212ENST00000623706 CTNNA2P26232 953 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 SMARCA1P28370 1054 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 ARL3P36405 182 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 ARHGAP4P98171 946 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 TRPC3Q13507 836 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 SMAD1Q15797 465 aaKnown RBP3.88□□□□□ -1.79
ATRX-212ENST00000623706 GEN1Q17RS7 908 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 HDXQ7Z353 690 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 HOMER3Q9NSC5 361 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 ORC6Q9Y5N6 252 aa3.88□□□□□ -1.79
ATRX-212ENST00000623706 A0A1B0GW55 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 FAM25AB3EWG3 89 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 FAM25CB3EWG5 89 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 FAM25GB3EWG6 89 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4L2P0CJ85 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4L3P0CJ86 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4L4P0CJ87 422 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4L5P0CJ88 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4L6P0CJ89 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4L7P0CJ90 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 TNFAIP2Q03169 654 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.87□□□□□ -1.79
ATRX-212ENST00000623706 CCSAPQ6IQ19 270 aaPredicted RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 HMBOX1Q6NT76 420 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 GALNT18Q6P9A2 607 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 C16orf87Q6PH81 154 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 CCDC13Q8IYE1 715 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 SYMPKQ92797 1274 aaKnown RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 NUP62CLQ9H1M0 184 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 VCPKMTQ9H867 229 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 FBRSL1Q9HCM7 1045 aaKnown RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.87□□□□□ -1.79
ATRX-212ENST00000623706 DUX4Q9UBX2 424 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 SEPT3Q9UH03 358 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 MCF2P10911 925 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 STX1BP61266 288 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 SAFBQ15424 915 aaKnown RBP eCLIP3.87□□□□□ -1.79
ATRX-212ENST00000623706 USP51Q70EK9 711 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 ATPIF1Q9UII2 106 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 GIT1Q9Y2X7 761 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 MAFKO60675 156 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 ETS2P15036 469 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 ABL2P42684 1182 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RAB7AP51149 207 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 BCAP31P51572 246 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 MUM1Q2TAK8 710 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DENND2CQ68D51 928 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 KLHL35Q6PF15 583 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 ARMC2Q8NEN0 867 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 NLRP4Q96MN2 994 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 SAP30BPQ9UHR5 308 aaKnown RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 EVLQ9UI08 416 aaPredicted RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 FAM170AA1A519 330 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RSPH10B2B2RC85 870 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 SRGAP3O43295 1099 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 NEMFO60524 1076 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RSPH10BP0C881 870 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 TOP1P11387 765 aaKnown RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 GJA1P17302 382 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 HDLBPQ00341 1268 aaKnown RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 BFSP1Q12934 665 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 OCLNQ16625 522 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 EP400NLQ6ZTU2 488 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 OTUD5Q96G74 571 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 OLFM1Q99784 485 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RIOK2Q9BVS4 552 aaKnown RBP3.87□□□□□ -1.79
ATRX-212ENST00000623706 VPS37BQ9H9H4 285 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 HSF2BPO75031 334 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 ATP6V1G1O75348 118 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 MYL3P08590 195 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 GPC3P51654 580 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 EIF4G2P78344 907 aaKnown RBP eCLIP3.87□□□□□ -1.79
ATRX-212ENST00000623706 PMPCAQ10713 525 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RCN2Q14257 317 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 CDH24Q86UP0 819 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 EXO5Q9H790 373 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 VTI1BQ9UEU0 232 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 DCDC2Q9UHG0 476 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 RWDD3Q9Y3V2 267 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 FHOD1Q9Y613 1164 aa3.87□□□□□ -1.79
ATRX-212ENST00000623706 GNB5O14775 395 aa3.86□□□□□ -1.79
ATRX-212ENST00000623706 TRAK2O60296 914 aa3.86□□□□□ -1.79
ATRX-212ENST00000623706 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
ATRX-212ENST00000623706 PDHA1P08559 390 aa3.86□□□□□ -1.79
ATRX-212ENST00000623706 CAPN2P17655 700 aa3.86□□□□□ -1.79
ATRX-212ENST00000623706 HSPA1LP34931 641 aa3.86□□□□□ -1.79
ATRX-212ENST00000623706 CDC16Q13042 620 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms