RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 SNCAIPQ9Y6H5 919 aa8.7□□□□□ -1.02
CDKL5-204ENST00000623364 CHD7Q9P2D1 2997 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 EP300Q09472 2414 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-204ENST00000623364 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 KCNQ3O43525 872 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 IRS1P35568 1242 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 PPATQ06203 517 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 TRIM60Q495X7 471 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
CDKL5-204ENST00000623364 SLC39A5Q6ZMH5 540 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 TRIB2Q92519 343 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 UPF3BQ9BZI7 483 aaKnown RBP8.69□□□□□ -1.02
CDKL5-204ENST00000623364 TACC3Q9Y6A5 838 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 GAKO14976 1311 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 MYBBP1AQ9BQG0 1328 aaKnown RBP8.69□□□□□ -1.02
CDKL5-204ENST00000623364 CEMIPQ8WUJ3 1361 aa8.69□□□□□ -1.02
CDKL5-204ENST00000623364 ECM29Q5VYK3 1845 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 DNM1LO00429 736 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 RAG1P15918 1043 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 MTHFSDQ2M296 383 aaKnown RBP8.68□□□□□ -1.02
CDKL5-204ENST00000623364 PPP2R2DQ66LE6 453 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 LURAP1LQ8IV03 231 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 SMCR8Q8TEV9 937 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-204ENST00000623364 NKD2Q969F2 451 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-204ENST00000623364 RPAP1Q9BWH6 1393 aaPredicted RBP8.68□□□□□ -1.02
CDKL5-204ENST00000623364 COL4A1P02462 1669 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 TECTAO75443 2155 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 CEP250Q9BV73 2442 aa8.68□□□□□ -1.02
CDKL5-204ENST00000623364 H0Y858 1186 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 ZBTB22O15209 634 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 RPS8P62241 208 aaKnown RBP8.67□□□□□ -1.02
CDKL5-204ENST00000623364 EPHA10Q5JZY3 1008 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 TTLL7Q6ZT98 887 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 WRNIP1Q96S55 665 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 CARD11Q9BXL7 1154 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 TLR9Q9NR96 1032 aa8.67□□□□□ -1.02
CDKL5-204ENST00000623364 AOX1Q06278 1338 aa8.66□□□□□ -1.02
CDKL5-204ENST00000623364 SH3TC1Q8TE82 1336 aa8.66□□□□□ -1.02
CDKL5-204ENST00000623364 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
CDKL5-204ENST00000623364 CCND3P30281 292 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-204ENST00000623364 NBL1P41271 181 aa8.66□□□□□ -1.02
CDKL5-204ENST00000623364 CACNB2Q08289 660 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-204ENST00000623364 NBPF20Q3BBV1 942 aa8.66□□□□□ -1.02
CDKL5-204ENST00000623364 TTLL5Q6EMB2 1281 aa8.66□□□□□ -1.02
CDKL5-204ENST00000623364 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
CDKL5-204ENST00000623364 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDKL5-204ENST00000623364 BSDC1Q9NW68 430 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-204ENST00000623364 USP9XQ93008 2570 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-204ENST00000623364 ZIC2O95409 532 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-204ENST00000623364 CLTBP09497 229 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 SNX17Q15036 470 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 LEXMQ3ZCV2 418 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 FBXL6Q8N531 539 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 ANKRD13CQ8N6S4 541 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 IL17REQ8NFR9 667 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 SPDYE1Q8NFV5 336 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-204ENST00000623364 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 PRMT6Q96LA8 375 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-204ENST00000623364 TRMT112Q9UI30 125 aaKnown RBP8.65□□□□□ -1.02
CDKL5-204ENST00000623364 GJD2Q9UKL4 321 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.02
CDKL5-204ENST00000623364 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-204ENST00000623364 RLFQ13129 1914 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 WDR87Q6ZQQ6 2873 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 TRIOO75962 3097 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 TMEM221A6NGB7 291 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 M0R296 226 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 KIAA0355O15063 1070 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 IL9P15248 144 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 ZKSCAN1P17029 563 aaPredicted RBP8.64□□□□□ -1.03
CDKL5-204ENST00000623364 CYP2B6P20813 491 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 MOGSQ13724 837 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 PUS10Q3MIT2 529 aaKnown RBP8.64□□□□□ -1.03
CDKL5-204ENST00000623364 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 RASIP1Q5U651 963 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
CDKL5-204ENST00000623364 GPAT2Q6NUI2 795 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 TEPSINQ96N21 525 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 ALG13Q9NP73 1137 aaKnown RBP8.64□□□□□ -1.03
CDKL5-204ENST00000623364 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
CDKL5-204ENST00000623364 DNAH14Q0VDD8 3507 aa8.64□□□□□ -1.03
CDKL5-204ENST00000623364 MYO15AQ9UKN7 3530 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 XDHP47989 1333 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 GNAT3A8MTJ3 354 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 MSCO60682 206 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 KDM4AO75164 1064 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 XRCC5P13010 732 aaKnown RBP8.63□□□□□ -1.03
CDKL5-204ENST00000623364 SLC5A1P13866 664 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 TLE2Q04725 743 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 DMWDQ09019 674 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 SF3B3Q15393 1217 aaKnown RBP8.63□□□□□ -1.03
CDKL5-204ENST00000623364 FAM110CQ1W6H9 321 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 KRT40Q6A162 431 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 FASTKD5Q7L8L6 764 aaKnown RBP8.63□□□□□ -1.03
CDKL5-204ENST00000623364 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
CDKL5-204ENST00000623364 LPAR1Q92633 364 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms