RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 USP2O75604 605 aaPredicted RBP22.12■■□□□ 1.13
LITAF-220ENST00000620789 NEFLP07196 543 aa22.12■■□□□ 1.13
LITAF-220ENST00000620789 LDLRAD1Q5T700 205 aa22.12■■□□□ 1.13
LITAF-220ENST00000620789 ZSCAN25Q6NSZ9 544 aa22.12■■□□□ 1.13
LITAF-220ENST00000620789 CDK5RAP2Q96SN8 1893 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 FOCADQ5VW36 1801 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 COL2A1P02458 1487 aaPredicted RBP22.11■■□□□ 1.13
LITAF-220ENST00000620789 MAGEB6P1A0A0J9YX57 407 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 IREB2P48200 963 aaKnown RBP22.11■■□□□ 1.13
LITAF-220ENST00000620789 ZNF157P51786 506 aaPredicted RBP22.11■■□□□ 1.13
LITAF-220ENST00000620789 GRM1Q13255 1194 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 UBE3CQ15386 1083 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 SH3BP5LQ7L8J4 393 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 RIOK1Q9BRS2 568 aaKnown RBP22.11■■□□□ 1.13
LITAF-220ENST00000620789 OSBPL5Q9H0X9 879 aaPredicted RBP22.11■■□□□ 1.13
LITAF-220ENST00000620789 ATRNL1Q5VV63 1379 aa22.11■■□□□ 1.13
LITAF-220ENST00000620789 AK9Q5TCS8 1911 aa22.1■■□□□ 1.13
LITAF-220ENST00000620789 DCAF15Q66K64 600 aa22.1■■□□□ 1.13
LITAF-220ENST00000620789 PLEKHM2Q8IWE5 1019 aa22.1■■□□□ 1.13
LITAF-220ENST00000620789 ZSCAN29Q8IWY8 852 aaPredicted RBP22.1■■□□□ 1.13
LITAF-220ENST00000620789 JMYQ8N9B5 988 aa22.1■■□□□ 1.13
LITAF-220ENST00000620789 TGFBRAP1Q8WUH2 860 aa22.1■■□□□ 1.13
LITAF-220ENST00000620789 CSRNP1Q96S65 589 aa22.1■■□□□ 1.13
LITAF-220ENST00000620789 THSD7BQ9C0I4 1608 aa22.09■■□□□ 1.13
LITAF-220ENST00000620789 DDTLA6NHG4 134 aaPredicted RBP22.09■■□□□ 1.13
LITAF-220ENST00000620789 UNCXA6NJT0 531 aa22.09■■□□□ 1.13
LITAF-220ENST00000620789 CHGBP05060 677 aa22.09■■□□□ 1.13
LITAF-220ENST00000620789 SLFNL1Q499Z3 407 aa22.09■■□□□ 1.13
LITAF-220ENST00000620789 CCDC102AQ96A19 550 aa22.09■■□□□ 1.13
LITAF-220ENST00000620789 PCNTO95613 3336 aa22.09■■□□□ 1.13
LITAF-220ENST00000620789 OTOFQ9HC10 1997 aa22.08■■□□□ 1.13
LITAF-220ENST00000620789 FLT1P17948 1338 aa22.08■■□□□ 1.13
LITAF-220ENST00000620789 SLC10A3P09131 477 aa22.08■■□□□ 1.13
LITAF-220ENST00000620789 MAPKAPK5Q8IW41 473 aa22.08■■□□□ 1.13
LITAF-220ENST00000620789 OSBPL3Q9H4L5 887 aa22.08■■□□□ 1.13
LITAF-220ENST00000620789 FAM155AB1AL88 458 aaPredicted RBP22.07■■□□□ 1.12
LITAF-220ENST00000620789 LRRFIP1Q32MZ4 808 aaKnown RBP22.07■■□□□ 1.12
LITAF-220ENST00000620789 MIGA2Q7L4E1 593 aa22.07■■□□□ 1.12
LITAF-220ENST00000620789 RASAL3Q86YV0 1011 aa22.07■■□□□ 1.12
LITAF-220ENST00000620789 ANKRD13AQ8IZ07 590 aa22.07■■□□□ 1.12
LITAF-220ENST00000620789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.07■■□□□ 1.12
LITAF-220ENST00000620789 ZNF341Q9BYN7 854 aa22.07■■□□□ 1.12
LITAF-220ENST00000620789 RNF113AO15541 343 aaKnown RBP22.06■■□□□ 1.12
LITAF-220ENST00000620789 AOC2O75106 756 aa22.06■■□□□ 1.12
LITAF-220ENST00000620789 ZFYP08048 801 aaPredicted RBP22.06■■□□□ 1.12
LITAF-220ENST00000620789 USP5P45974 858 aa22.06■■□□□ 1.12
LITAF-220ENST00000620789 NOGQ13253 232 aa22.06■■□□□ 1.12
LITAF-220ENST00000620789 LCORLQ8N3X6 602 aa22.06■■□□□ 1.12
LITAF-220ENST00000620789 CLMNQ96JQ2 1002 aa22.06■■□□□ 1.12
LITAF-220ENST00000620789 FSD1Q9BTV5 496 aa22.06■■□□□ 1.12
LITAF-220ENST00000620789 CRNKL1Q9BZJ0 848 aaKnown RBP22.06■■□□□ 1.12
LITAF-220ENST00000620789 DHX36Q9H2U1 1008 aaKnown RBP22.06■■□□□ 1.12
LITAF-220ENST00000620789 MBD4O95243 580 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 PDE4AP27815 886 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 MAP2K2P36507 400 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 MAP3K9P80192 1104 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.05■■□□□ 1.12
LITAF-220ENST00000620789 EVI5LQ96CN4 794 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 WRNIP1Q96S55 665 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 ARMT1Q9H993 441 aa22.05■■□□□ 1.12
LITAF-220ENST00000620789 MAP3K10Q02779 954 aa22.04■■□□□ 1.12
LITAF-220ENST00000620789 APPBP2Q92624 585 aa22.04■■□□□ 1.12
LITAF-220ENST00000620789 SLC10A4Q96EP9 437 aa22.04■■□□□ 1.12
LITAF-220ENST00000620789 PUS7LQ9H0K6 701 aaKnown RBP22.04■■□□□ 1.12
LITAF-220ENST00000620789 VGLL4Q14135 290 aa22.03■■□□□ 1.12
LITAF-220ENST00000620789 CENPQQ7L2Z9 268 aaPredicted RBP22.03■■□□□ 1.12
LITAF-220ENST00000620789 AIDAQ96BJ3 306 aa22.03■■□□□ 1.12
LITAF-220ENST00000620789 ZNF112Q9UJU3 913 aa22.03■■□□□ 1.12
LITAF-220ENST00000620789 CSADQ9Y600 493 aa22.03■■□□□ 1.12
LITAF-220ENST00000620789 DDX60LQ5H9U9 1706 aaKnown RBP22.03■■□□□ 1.12
LITAF-220ENST00000620789 TBC1D12O60347 775 aa22.02■■□□□ 1.12
LITAF-220ENST00000620789 OSBP2Q969R2 916 aa22.02■■□□□ 1.12
LITAF-220ENST00000620789 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
LITAF-220ENST00000620789 PI4KBQ9UBF8 816 aa22.02■■□□□ 1.12
LITAF-220ENST00000620789 SAP30BPQ9UHR5 308 aaKnown RBP22.02■■□□□ 1.12
LITAF-220ENST00000620789 PALD1Q9ULE6 856 aa22.02■■□□□ 1.12
LITAF-220ENST00000620789 NAV1Q8NEY1 1877 aa22.02■■□□□ 1.12
LITAF-220ENST00000620789 MYH1P12882 1939 aa22.02■■□□□ 1.11
LITAF-220ENST00000620789 SIPA1L1O43166 1804 aa22.01■■□□□ 1.11
LITAF-220ENST00000620789 TRIM6-TRIM34B2RNG4 842 aa22.01■■□□□ 1.11
LITAF-220ENST00000620789 SLURP2P0DP57 97 aa22.01■■□□□ 1.11
LITAF-220ENST00000620789 SDR42E1Q8WUS8 393 aa22.01■■□□□ 1.11
LITAF-220ENST00000620789 ZKSCAN4Q969J2 545 aaPredicted RBP22.01■■□□□ 1.11
LITAF-220ENST00000620789 ZIC5Q96T25 663 aa22.01■■□□□ 1.11
LITAF-220ENST00000620789 ELP3Q9H9T3 547 aa22.01■■□□□ 1.11
LITAF-220ENST00000620789 PHF20L1A8MW92 1017 aa22■■□□□ 1.11
LITAF-220ENST00000620789 HLA-DOAP06340 250 aa22■■□□□ 1.11
LITAF-220ENST00000620789 INPP5BP32019 993 aa22■■□□□ 1.11
LITAF-220ENST00000620789 KIF23Q02241 960 aaPredicted RBP22■■□□□ 1.11
LITAF-220ENST00000620789 SPRYD7Q5W111 196 aa22■■□□□ 1.11
LITAF-220ENST00000620789 TICAM2Q86XR7 235 aa22■■□□□ 1.11
LITAF-220ENST00000620789 WNK4Q96J92 1243 aa22■■□□□ 1.11
LITAF-220ENST00000620789 CCDC136Q96JN2 1154 aa22■■□□□ 1.11
LITAF-220ENST00000620789 DCP1AQ9NPI6 582 aaPredicted RBP22■■□□□ 1.11
LITAF-220ENST00000620789 HERC5Q9UII4 1024 aaKnown RBP22■■□□□ 1.11
LITAF-220ENST00000620789 SNCAIPQ9Y6H5 919 aa22■■□□□ 1.11
LITAF-220ENST00000620789 PRKAB2O43741 272 aa21.99■■□□□ 1.11
LITAF-220ENST00000620789 ZBTB48P10074 688 aaPredicted RBP21.99■■□□□ 1.11
LITAF-220ENST00000620789 MAP2K1Q02750 393 aaPredicted RBP21.99■■□□□ 1.11
LITAF-220ENST00000620789 ZMYM1Q5SVZ6 1142 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms