RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 MIPOL1Q8TD10 442 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 PPP1R12BO60237 982 aaPredicted RBP12.38□□□□□ -0.43
HNF4A-209ENST00000619550 NLRP5P59047 1200 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 CFAP58Q5T655 872 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
HNF4A-209ENST00000619550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
HNF4A-209ENST00000619550 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 LUC7L2Q9Y383 392 aaKnown RBP12.38□□□□□ -0.43
HNF4A-209ENST00000619550 TTC37Q6PGP7 1564 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 BCORL1Q5H9F3 1711 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 UBA7P41226 1012 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 AMPD3Q01432 767 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 MLKLQ8NB16 471 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■□□□ 13.2
HNF4A-209ENST00000619550 CEP83Q9Y592 693 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 GNPATO15228 680 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 RABGGTAQ92696 567 aa12.38□□□□□ -0.43
HNF4A-209ENST00000619550 METTL22Q9BUU2 404 aaPredicted RBP12.38□□□□□ -0.43
HNF4A-209ENST00000619550 STX17P56962 302 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 PPFIA1Q13136 1202 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 TRIM14Q14142 442 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 CCDC122Q5T0U0 273 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 DHX58Q96C10 678 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 CCDC42Q96M95 316 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
HNF4A-209ENST00000619550 IFI16Q16666 785 aaKnown RBP12.37□□□□□ -0.43
HNF4A-209ENST00000619550 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 ADALQ6DHV7 355 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 SPATA24Q86W54 205 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 PSMA7O14818 248 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 ZKSCAN8Q15776 578 aaPredicted RBP12.37□□□□□ -0.43
HNF4A-209ENST00000619550 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 TMTC1Q8IUR5 882 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 JAK2O60674 1132 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 DTNBO60941 627 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
HNF4A-209ENST00000619550 FAM227BQ96M60 508 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
HNF4A-209ENST00000619550 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 LACTBP83111 547 aaPredicted RBP12.36□□□□□ -0.43
HNF4A-209ENST00000619550 CNBD1Q8NA66 436 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 TCP11L1Q9NUJ3 509 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 USP21Q9UK80 565 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 UBXN1Q04323 297 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 MTX1Q13505 466 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 CYP26C1Q6V0L0 522 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 CHST3Q7LGC8 479 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 MPHOSPH6Q99547 160 aaKnown RBP12.36□□□□□ -0.43
HNF4A-209ENST00000619550 DNAI2Q9GZS0 605 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 BUB1BO60566 1050 aaPredicted RBP12.36□□□□□ -0.43
HNF4A-209ENST00000619550 NBPF7P0C2Y1 421 aaPredicted RBP12.36□□□□□ -0.43
HNF4A-209ENST00000619550 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 PPP4R3AQ6IN85 833 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 PPP2R2CQ9Y2T4 447 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
HNF4A-209ENST00000619550 GOLGA6BA6NDN3 693 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 FBF1Q8TES7 1133 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 CCDC87Q9NVE4 849 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 NFE2L3Q9Y4A8 694 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 WTAPQ15007 396 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 CPLX4Q7Z7G2 160 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 STMN4Q9H169 189 aaPredicted RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 PHLPP2Q6ZVD8 1323 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 CLCN6P51797 869 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 IFT74Q96LB3 600 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 PRDM15P57071 1507 aaPredicted RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 RNF113AO15541 343 aaKnown RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 CUTAO60888 179 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 RTN1Q16799 776 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 SECISBP2LQ93073 1101 aaKnown RBP12.35□□□□□ -0.43
HNF4A-209ENST00000619550 CABS1Q96KC9 395 aa12.35□□□□□ -0.43
HNF4A-209ENST00000619550 PDE8AO60658 829 aa12.34□□□□□ -0.43
HNF4A-209ENST00000619550 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
HNF4A-209ENST00000619550 SSH3Q8TE77 659 aa12.34□□□□□ -0.43
HNF4A-209ENST00000619550 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
HNF4A-209ENST00000619550 TSGA10Q9BZW7 698 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms