RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IFIT5Q13325 482 aaKnown RBP5.84□□□□□ -1.47
SNCA-213ENST00000618500 SNX17Q15036 470 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 ZNF697Q5TEC3 545 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 APOBEC3HQ6NTF7 200 aaKnown RBP5.84□□□□□ -1.47
SNCA-213ENST00000618500 USP6NLQ92738 828 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 PAWRQ96IZ0 340 aaKnown RBP5.84□□□□□ -1.47
SNCA-213ENST00000618500 IDI2Q9BXS1 227 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 FBXO3Q9UK99 471 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 GJD2Q9UKL4 321 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 PFASO15067 1338 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 FLT3LGP49771 235 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 PABPC4Q13310 644 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNCA-213ENST00000618500 FAM84BQ96KN1 310 aaPredicted RBP5.84□□□□□ -1.47
SNCA-213ENST00000618500 DEFB118Q96PH6 123 aa5.84□□□□□ -1.47
SNCA-213ENST00000618500 HMX1Q9NP08 348 aaPredicted RBP5.84□□□□□ -1.47
SNCA-213ENST00000618500 SEMA3EO15041 775 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 TJAP1Q5JTD0 557 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 VGLL2Q8N8G2 317 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 PI4KAP2A4QPH2 592 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 CTNND1O60716 968 aaKnown RBP5.83□□□□□ -1.48
SNCA-213ENST00000618500 ALDH1L1O75891 902 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 UBE3BQ7Z3V4 1068 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 CDAN1Q8IWY9 1227 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 PI4KAP1Q8N8J0 262 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 OSBPL5Q9H0X9 879 aaPredicted RBP5.83□□□□□ -1.48
SNCA-213ENST00000618500 GAKO14976 1311 aa5.83□□□□□ -1.48
SNCA-213ENST00000618500 TCP10L2B9ZVM9 353 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 TNPO2O14787 897 aaKnown RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 MSCO60682 206 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 RABL6Q3YEC7 729 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 RTL5Q5HYW3 569 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 AKNAD1Q5T1N1 836 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 MAFAQ8NHW3 353 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 ATXN2LQ8WWM7 1075 aaKnown RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 ZKSCAN4Q969J2 545 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 PTPRAP18433 802 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 RBM5P52756 815 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNCA-213ENST00000618500 Q7L0L9 218 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 WDR66Q8TBY9 1149 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 DIS3LQ8TF46 1054 aaKnown RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 DNAAF4Q8WXU2 420 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 FAM163AQ96GL9 167 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 STK31Q9BXU1 1019 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 LRRC37A2A6NM11 1700 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 COL9A1P20849 921 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 FGFR2P21802 821 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 MKRN4PQ13434 485 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 C8orf58Q8NAV2 365 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 CDX2Q99626 313 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 SEMA6BQ9H3T3 888 aa5.82□□□□□ -1.48
SNCA-213ENST00000618500 BIN2Q9UBW5 565 aaPredicted RBP5.82□□□□□ -1.48
SNCA-213ENST00000618500 HOXA7P31268 230 aaPredicted RBP5.81□□□□□ -1.48
SNCA-213ENST00000618500 MORN1Q5T089 497 aa5.81□□□□□ -1.48
SNCA-213ENST00000618500 DNM1LO00429 736 aa5.81□□□□□ -1.48
SNCA-213ENST00000618500 INPP5BP32019 993 aa5.81□□□□□ -1.48
SNCA-213ENST00000618500 CWF19L2Q2TBE0 894 aaKnown RBP5.81□□□□□ -1.48
SNCA-213ENST00000618500 BEND3Q5T5X7 828 aa5.81□□□□□ -1.48
SNCA-213ENST00000618500 FAM122AQ96E09 287 aa5.81□□□□□ -1.48
SNCA-213ENST00000618500 F8W031 263 aaPredicted RBP5.8□□□□□ -1.48
SNCA-213ENST00000618500 ELNP15502 786 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 MAPK4P31152 587 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 LRRC26Q2I0M4 334 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 CAVIN4Q5BKX8 364 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 LBX2Q6XYB7 198 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 CCDC85AQ96PX6 553 aaPredicted RBP5.8□□□□□ -1.48
SNCA-213ENST00000618500 WDR18Q9BV38 432 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 PICK1Q9NRD5 415 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 FAM198AQ9UFP1 575 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 HOXC6P09630 235 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 FLIIQ13045 1269 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 CCDC57Q2TAC2 916 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 APBA2Q99767 749 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 NRBP1Q9UHY1 535 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 TAOK2Q9UL54 1235 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 TAF5LO75529 589 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 CDC42EP5Q6NZY7 148 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 METTL16Q86W50 562 aaKnown RBP5.8□□□□□ -1.48
SNCA-213ENST00000618500 ZGPATQ8N5A5 531 aaKnown RBP5.8□□□□□ -1.48
SNCA-213ENST00000618500 TRIB2Q92519 343 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 ZMYND8Q9ULU4 1186 aaPredicted RBP5.8□□□□□ -1.48
SNCA-213ENST00000618500 DAGLAQ9Y4D2 1042 aa5.8□□□□□ -1.48
SNCA-213ENST00000618500 GBF1Q92538 1859 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 GRM8O00222 908 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 CYP2C8P10632 490 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 RGS2P41220 211 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 WDR43Q15061 677 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNCA-213ENST00000618500 LDHAL6AQ6ZMR3 332 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 SLF2Q8IX21 1173 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 C1QTNF1Q9BXJ1 281 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 PDE8BO95263 885 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 PUM3Q15397 648 aaKnown RBP5.79□□□□□ -1.48
SNCA-213ENST00000618500 GRIK5Q16478 980 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 OLFML2BQ68BL8 750 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 LPAR1Q92633 364 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 LBHD1Q9BQE6 289 aaPredicted RBP5.79□□□□□ -1.48
SNCA-213ENST00000618500 AS3MTQ9HBK9 375 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 CNNM1Q9NRU3 951 aa5.79□□□□□ -1.48
SNCA-213ENST00000618500 KIAA0100Q14667 2235 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms