RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 ZNF496Q96IT1 587 aaPredicted RBP19.87■□□□□ 0.77
ATXN2-227ENST00000616825 SLC1A4P43007 532 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 JAKMIP2Q96AA8 810 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 FAM227BQ96M60 508 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 IVLP07476 585 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 EIF6P56537 245 aaKnown RBP19.87■□□□□ 0.77
ATXN2-227ENST00000616825 IFT81Q8WYA0 676 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 GJA3Q9Y6H8 435 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 LMTK3Q96Q04 1460 aa19.87■□□□□ 0.77
ATXN2-227ENST00000616825 HARSP12081 509 aaKnown RBP19.86■□□□□ 0.77
ATXN2-227ENST00000616825 SMC6Q96SB8 1091 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 SERPINA10Q9UK55 444 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 TXKP42681 527 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 BRDTQ58F21 947 aaPredicted RBP19.86■□□□□ 0.77
ATXN2-227ENST00000616825 INF2Q27J81 1249 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 CCDC25Q86WR0 208 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 IGSF22Q8N9C0 903 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 VPS16Q9H269 839 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 SNX14Q9Y5W7 946 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 NPC1L1Q9UHC9 1359 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 CCDC169A6NNP5 214 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 PPP1R7Q15435 360 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 DPP8Q6V1X1 898 aaPredicted RBP19.86■□□□□ 0.77
ATXN2-227ENST00000616825 CSGALNACT2Q8N6G5 542 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 ANKS4BQ8N8V4 417 aa19.86■□□□□ 0.77
ATXN2-227ENST00000616825 CUTAO60888 179 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 ECM2O94769 699 aaPredicted RBP19.85■□□□□ 0.77
ATXN2-227ENST00000616825 MNAT1P51948 309 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 FAM173BQ6P4H8 233 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.85■□□□□ 0.77
ATXN2-227ENST00000616825 FAM169AQ9Y6X4 670 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
ATXN2-227ENST00000616825 ARHGEF35A5YM69 484 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 NONOQ15233 471 aaKnown RBP eCLIP19.85■□□□□ 0.776e-8■■■■□ 23
ATXN2-227ENST00000616825 MLKLQ8NB16 471 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 SUCLG2Q96I99 432 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 TMOD4Q9NZQ9 345 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 RSPH14Q9UHP6 348 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 TAF5LO75529 589 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 RHOXF2BP0C7M4 288 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 TTC38Q5R3I4 469 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 KIFAP3Q92845 792 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 IFT74Q96LB3 600 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 RHOXF2Q9BQY4 288 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
ATXN2-227ENST00000616825 RAPGEF6Q8TEU7 1601 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 CAPN2P17655 700 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 CFAP58Q5T655 872 aa19.85■□□□□ 0.77
ATXN2-227ENST00000616825 POLR2DO15514 142 aaKnown RBP19.84■□□□□ 0.77
ATXN2-227ENST00000616825 SLC8A3P57103 927 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 TRIM14Q14142 442 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 LARGE2Q8N3Y3 721 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 LRWD1Q9UFC0 647 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 CHMP2AO43633 222 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 MRPS9P82933 396 aaKnown RBP19.84■□□□□ 0.77
ATXN2-227ENST00000616825 KRT25Q7Z3Z0 450 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 AATFQ9NY61 560 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATXN2-227ENST00000616825 SPOPO43791 374 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 TNFAIP3P21580 790 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 HERC4Q5GLZ8 1057 aaPredicted RBP19.84■□□□□ 0.77
ATXN2-227ENST00000616825 TSGA10Q9BZW7 698 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 IVNS1ABPQ9Y6Y0 642 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 USP19O94966 1318 aa19.84■□□□□ 0.77
ATXN2-227ENST00000616825 PNMA6EA0A0J9YXQ4 647 aa19.83■□□□□ 0.77
ATXN2-227ENST00000616825 CCDC14Q49A88 953 aa19.83■□□□□ 0.77
ATXN2-227ENST00000616825 CSRNP2Q9H175 543 aa19.83■□□□□ 0.77
ATXN2-227ENST00000616825 CPLX4Q7Z7G2 160 aa19.83■□□□□ 0.77
ATXN2-227ENST00000616825 NAP1L3Q99457 506 aaPredicted RBP19.83■□□□□ 0.77
ATXN2-227ENST00000616825 MAPK8IP1Q9UQF2 711 aa19.83■□□□□ 0.77
ATXN2-227ENST00000616825 EBAG9O00559 213 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 SEL1L2Q5TEA6 688 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 OTUD7BQ6GQQ9 843 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 TBC1D22AQ8WUA7 517 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 HOOK2Q96ED9 719 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 SELENOSQ9BQE4 189 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 RRAGDQ9NQL2 400 aaPredicted RBP19.83■□□□□ 0.76
ATXN2-227ENST00000616825 CCDC26Q8TAB7 109 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 TRIM35Q9UPQ4 493 aa19.83■□□□□ 0.76
ATXN2-227ENST00000616825 CCDC117Q8IWD4 279 aaPredicted RBP19.82■□□□□ 0.76
ATXN2-227ENST00000616825 H0YIN7 160 aa19.82■□□□□ 0.76
ATXN2-227ENST00000616825 CCNT1O60563 726 aaKnown RBP19.82■□□□□ 0.76
ATXN2-227ENST00000616825 KRT5P13647 590 aa19.82■□□□□ 0.76
ATXN2-227ENST00000616825 PDE6BP35913 854 aa19.82■□□□□ 0.76
ATXN2-227ENST00000616825 IPO4Q8TEX9 1081 aaKnown RBP19.82■□□□□ 0.76
ATXN2-227ENST00000616825 LZTS2Q9BRK4 669 aa19.82■□□□□ 0.76
ATXN2-227ENST00000616825 NOD1Q9Y239 953 aa19.82■□□□□ 0.76
ATXN2-227ENST00000616825 SMIM23A6NLE4 172 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 ZYXQ15942 572 aaKnown RBP19.81■□□□□ 0.76
ATXN2-227ENST00000616825 SNX29Q8TEQ0 813 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 ZEB2O60315 1214 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 KRT40Q6A162 431 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 EXOC7Q9UPT5 735 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 MROH5Q6ZUA9 1318 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 RPS8P62241 208 aaKnown RBP19.81■□□□□ 0.76
ATXN2-227ENST00000616825 CPXCR1Q8N123 301 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 TIGD1Q96MW7 591 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 MAK16Q9BXY0 300 aaKnown RBP19.81■□□□□ 0.76
ATXN2-227ENST00000616825 CTNND2Q9UQB3 1225 aa19.81■□□□□ 0.76
ATXN2-227ENST00000616825 ZAP70P43403 619 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms