RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 AATFQ9NY61 560 aaKnown RBP eCLIP18.18■□□□□ 0.5
SEMA3B-212ENST00000616701 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-212ENST00000616701 PRDM1O75626 825 aa18.17■□□□□ 0.5
SEMA3B-212ENST00000616701 PPARAQ07869 468 aa18.17■□□□□ 0.5
SEMA3B-212ENST00000616701 USP28Q96RU2 1077 aa18.17■□□□□ 0.5
SEMA3B-212ENST00000616701 MAP7D2Q96T17 732 aa18.17■□□□□ 0.5
SEMA3B-212ENST00000616701 CCDC82Q8N4S0 544 aa18.17■□□□□ 0.5
SEMA3B-212ENST00000616701 SERPINB2P05120 415 aa18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 DACT1Q9NYF0 836 aa18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 GOLGA8AA7E2F4 631 aa18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 ZBTB43O43298 467 aa18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 GRAPQ13588 217 aa18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 CMTR1Q8N1G2 835 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-212ENST00000616701 ZSCAN20P17040 1043 aaPredicted RBP18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 CCDC69A6NI79 296 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 PROM2Q8N271 834 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 ELP1O95163 1332 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 CCDC173Q0VFZ6 552 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
SEMA3B-212ENST00000616701 NR1I2O75469 434 aa18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 CACNA1SQ13698 1873 aa18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 KRT23Q9C075 422 aa18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 BAZ2AQ9UIF9 1905 aaKnown RBP18.14■□□□□ 0.49
SEMA3B-212ENST00000616701 CHD4Q14839 1912 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 GRIK5Q16478 980 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 FAM217BQ9NTX9 383 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 BRWD3Q6RI45 1802 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 DDR1Q08345 913 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 TXNRD1Q16881 649 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 ALG1Q9BT22 464 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 MYH13Q9UKX3 1938 aa18.13■□□□□ 0.49
SEMA3B-212ENST00000616701 RANBP6O60518 1105 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 GPSM2P81274 684 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 WTAPQ15007 396 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 FBXO18Q8NFZ0 1043 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 USP17L21D6R901 530 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 CYP2D6P10635 497 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 GOLGB1Q14789 3259 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 ADRA2BP18089 450 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 ST5P78524 1137 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 PPP1R9BQ96SB3 815 aa18.12■□□□□ 0.49
SEMA3B-212ENST00000616701 IGSF3O75054 1194 aa18.11■□□□□ 0.49
SEMA3B-212ENST00000616701 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
SEMA3B-212ENST00000616701 MPNDQ8N594 471 aa18.11■□□□□ 0.49
SEMA3B-212ENST00000616701 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
SEMA3B-212ENST00000616701 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
SEMA3B-212ENST00000616701 CLIC4Q9Y696 253 aa18.11■□□□□ 0.49
SEMA3B-212ENST00000616701 UBR3Q6ZT12 1888 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 ERICH2A1L162 156 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 SEMA3EO15041 775 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 UFL1O94874 794 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 ME1P48163 572 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 DIXDC1Q155Q3 683 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 CTR9Q6PD62 1173 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 CNPY4Q8N129 248 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 ZNF396Q96N95 335 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 UBAC1Q9BSL1 405 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 TNMDQ9H2S6 317 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 IRS2Q9Y4H2 1338 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 LETM1O95202 739 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 PLCB2Q00722 1185 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 NTRK3Q16288 839 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
SEMA3B-212ENST00000616701 GUCY1A2P33402 732 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 LIFRP42702 1097 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 SART3Q15020 963 aaKnown RBP18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 CCAR1Q8IX12 1150 aaKnown RBP18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 GOLPH3LQ9H4A5 285 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 RNF41Q9H4P4 317 aaPredicted RBP18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 XDHP47989 1333 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 CBX1P83916 185 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 ZNF827Q17R98 1081 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 CPLX2Q6PUV4 134 aaKnown RBP18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 ZBTB9Q96C00 473 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 FUCA2Q9BTY2 467 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 RCOR1Q9UKL0 485 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 TNKSO95271 1327 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
SEMA3B-212ENST00000616701 KRT40Q6A162 431 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms