RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
LHX1-202ENST00000616237 TRPA1O75762 1119 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 ZBTB48P10074 688 aaPredicted RBP20.75■□□□□ 0.91
LHX1-202ENST00000616237 DCAF15Q66K64 600 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 ZKSCAN4Q969J2 545 aaPredicted RBP20.75■□□□□ 0.91
LHX1-202ENST00000616237 OPTNQ96CV9 577 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 HOOK2Q96ED9 719 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 ZNF341Q9BYN7 854 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 SAGE1Q9NXZ1 904 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 ZNF112Q9UJU3 913 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 SNCAIPQ9Y6H5 919 aa20.75■□□□□ 0.91
LHX1-202ENST00000616237 MAP4K4O95819 1239 aaPredicted RBP20.74■□□□□ 0.91
LHX1-202ENST00000616237 CYP7A1P22680 504 aa20.74■□□□□ 0.91
LHX1-202ENST00000616237 INPP5BP32019 993 aa20.74■□□□□ 0.91
LHX1-202ENST00000616237 MAGEB6Q8N7X4 407 aa20.74■□□□□ 0.91
LHX1-202ENST00000616237 BOLA2Q9H3K6 86 aa20.74■□□□□ 0.91
LHX1-202ENST00000616237 AK9Q5TCS8 1911 aa20.74■□□□□ 0.91
LHX1-202ENST00000616237 ATP5JP18859 108 aa20.73■□□□□ 0.91
LHX1-202ENST00000616237 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
LHX1-202ENST00000616237 TEX11Q8IYF3 940 aa20.73■□□□□ 0.91
LHX1-202ENST00000616237 DNAJC2Q99543 621 aaKnown RBP20.73■□□□□ 0.91
LHX1-202ENST00000616237 CSADQ9Y600 493 aa20.73■□□□□ 0.91
LHX1-202ENST00000616237 GOLIM4O00461 696 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 BAG3O95817 575 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 MAP3K10Q02779 954 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 ZSCAN29Q8IWY8 852 aaPredicted RBP20.72■□□□□ 0.91
LHX1-202ENST00000616237 OSBPL5Q9H0X9 879 aaPredicted RBP20.72■□□□□ 0.91
LHX1-202ENST00000616237 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
LHX1-202ENST00000616237 LAMB1P07942 1786 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 MANSC4A6NHS7 340 aaPredicted RBP20.72■□□□□ 0.91
LHX1-202ENST00000616237 SPDYE5A6NIY4 337 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 PHF20L1A8MW92 1017 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 SREBF2Q12772 1141 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 MAP3K12Q12852 859 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 MS4A4AQ96JQ5 239 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 HAUS7Q99871 368 aa20.72■□□□□ 0.91
LHX1-202ENST00000616237 IGF2BP3O00425 579 aaKnown RBP eCLIP20.71■□□□□ 0.91
LHX1-202ENST00000616237 TTF1Q15361 905 aaPredicted RBP20.71■□□□□ 0.91
LHX1-202ENST00000616237 MIGA1Q8NAN2 632 aa20.71■□□□□ 0.91
LHX1-202ENST00000616237 OTUD5Q96G74 571 aa20.71■□□□□ 0.91
LHX1-202ENST00000616237 NOL10Q9BSC4 688 aaKnown RBP20.71■□□□□ 0.91
LHX1-202ENST00000616237 TESPA1A2RU30 521 aaPredicted RBP20.7■□□□□ 0.9
LHX1-202ENST00000616237 EXOC6Q8TAG9 804 aa20.7■□□□□ 0.9
LHX1-202ENST00000616237 TGFBRAP1Q8WUH2 860 aa20.7■□□□□ 0.9
LHX1-202ENST00000616237 PTPN18Q99952 460 aa20.7■□□□□ 0.9
LHX1-202ENST00000616237 PAG1Q9NWQ8 432 aa20.7■□□□□ 0.9
LHX1-202ENST00000616237 COL2A1P02458 1487 aaPredicted RBP20.7■□□□□ 0.9
LHX1-202ENST00000616237 CDK5RAP2Q96SN8 1893 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 CASP8AP2Q9UKL3 1982 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 TCRBV5S4A2TA0A5A2 114 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 FAM196BA6NMK8 535 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 PDE6AP16499 860 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 PLCG2P16885 1265 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 SLFNL1Q499Z3 407 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 ERO1BQ86YB8 467 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 IFNL1Q8IU54 200 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 MAPKAPK5Q8IW41 473 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 R3HDMLQ9H3Y0 253 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 ECHDC1Q9NTX5 307 aa20.69■□□□□ 0.9
LHX1-202ENST00000616237 FLT1P17948 1338 aa20.68■□□□□ 0.9
LHX1-202ENST00000616237 IRF6O14896 467 aa20.68■□□□□ 0.9
LHX1-202ENST00000616237 CHGBP05060 677 aa20.68■□□□□ 0.9
LHX1-202ENST00000616237 INHBEP58166 350 aa20.68■□□□□ 0.9
LHX1-202ENST00000616237 HDAC1Q13547 482 aaPredicted RBP20.68■□□□□ 0.9
LHX1-202ENST00000616237 NOL9Q5SY16 702 aaKnown RBP20.68■□□□□ 0.9
LHX1-202ENST00000616237 SLC9C2Q5TAH2 1124 aa20.68■□□□□ 0.9
LHX1-202ENST00000616237 TNS4Q8IZW8 715 aa20.68■□□□□ 0.9
LHX1-202ENST00000616237 OTUD7AQ8TE49 926 aaPredicted RBP20.68■□□□□ 0.9
LHX1-202ENST00000616237 RIOK1Q9BRS2 568 aaKnown RBP20.68■□□□□ 0.9
LHX1-202ENST00000616237 TBC1D12O60347 775 aa20.67■□□□□ 0.9
LHX1-202ENST00000616237 TMED8Q6PL24 325 aaPredicted RBP20.67■□□□□ 0.9
LHX1-202ENST00000616237 BRI3BPQ8WY22 251 aa20.67■□□□□ 0.9
LHX1-202ENST00000616237 SIPA1L1O43166 1804 aa20.67■□□□□ 0.9
LHX1-202ENST00000616237 FOCADQ5VW36 1801 aa20.67■□□□□ 0.9
LHX1-202ENST00000616237 ZNF532Q9HCE3 1301 aa20.67■□□□□ 0.9
LHX1-202ENST00000616237 PPIL2Q13356 520 aa20.66■□□□□ 0.9
LHX1-202ENST00000616237 CFHR5Q9BXR6 569 aa20.66■□□□□ 0.9
LHX1-202ENST00000616237 PPATQ06203 517 aa20.65■□□□□ 0.9
LHX1-202ENST00000616237 AAMPQ13685 434 aa20.65■□□□□ 0.9
LHX1-202ENST00000616237 RRP1BQ14684 758 aaKnown RBP20.65■□□□□ 0.9
LHX1-202ENST00000616237 PALD1Q9ULE6 856 aa20.65■□□□□ 0.9
LHX1-202ENST00000616237 CCL15-CCL14A0A0B4J2E2 113 aa20.64■□□□□ 0.89
LHX1-202ENST00000616237 ADD2P35612 726 aa20.64■□□□□ 0.89
LHX1-202ENST00000616237 GTF2A2P52657 109 aa20.64■□□□□ 0.89
LHX1-202ENST00000616237 CCL15Q16663 113 aa20.64■□□□□ 0.89
LHX1-202ENST00000616237 SCYL3Q8IZE3 742 aa20.64■□□□□ 0.89
LHX1-202ENST00000616237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.64■□□□□ 0.89
LHX1-202ENST00000616237 SAP30BPQ9UHR5 308 aaKnown RBP20.64■□□□□ 0.89
LHX1-202ENST00000616237 DHX36Q9H2U1 1008 aaKnown RBP20.63■□□□□ 0.89
LHX1-202ENST00000616237 DNAJC18Q9H819 358 aa20.63■□□□□ 0.89
LHX1-202ENST00000616237 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.63■□□□□ 0.89
LHX1-202ENST00000616237 PI4KBQ9UBF8 816 aa20.63■□□□□ 0.89
LHX1-202ENST00000616237 SALL3Q9BXA9 1300 aa20.63■□□□□ 0.89
LHX1-202ENST00000616237 MAGEB6P1A0A0J9YX57 407 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 CTNND1O60716 968 aaKnown RBP20.62■□□□□ 0.89
LHX1-202ENST00000616237 ALDH1A1P00352 501 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 ANKRD45Q5TZF3 282 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 METTL16Q86W50 562 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms