RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZSCAN29Q8IWY8 852 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-208ENST00000614678 HSPA8P11142 646 aaKnown RBP6.96□□□□□ -1.29
CPNE3-208ENST00000614678 NAA16Q6N069 864 aaPredicted RBP6.96□□□□□ -1.29
CPNE3-208ENST00000614678 LCORLQ8N3X6 602 aa6.96□□□□□ -1.29
CPNE3-208ENST00000614678 PUS7LQ9H0K6 701 aaKnown RBP6.96□□□□□ -1.29
CPNE3-208ENST00000614678 SNCAIPQ9Y6H5 919 aa6.96□□□□□ -1.29
CPNE3-208ENST00000614678 BAZ2AQ9UIF9 1905 aaKnown RBP6.96□□□□□ -1.29
CPNE3-208ENST00000614678 IRF6O14896 467 aa6.96□□□□□ -1.29
CPNE3-208ENST00000614678 SLC9C2Q5TAH2 1124 aa6.96□□□□□ -1.29
CPNE3-208ENST00000614678 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.96□□□□□ -1.29
CPNE3-208ENST00000614678 OPTNQ96CV9 577 aa6.96□□□□□ -1.29
CPNE3-208ENST00000614678 ZNF532Q9HCE3 1301 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 TCRBV5S4A2TA0A5A2 114 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 SEMA3EO15041 775 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 MS4A1P11836 297 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 PLCD1P51178 756 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 CLEC10AQ8IUN9 316 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 SLC44A5Q8NCS7 719 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 ARMT1Q9H993 441 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 RNF186Q9NXI6 227 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 DOCK2Q92608 1830 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 PHF20L1A8MW92 1017 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 PDE6AP16499 860 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 SPRYD7Q5W111 196 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 PI4K2BQ8TCG2 481 aa6.96□□□□□ -1.3
CPNE3-208ENST00000614678 HMMRO75330 724 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 UQCRFS1P1P0C7P4 283 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 HDLBPQ00341 1268 aaKnown RBP6.95□□□□□ -1.3
CPNE3-208ENST00000614678 TEX11Q8IYF3 940 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 RIOK1Q9BRS2 568 aaKnown RBP6.95□□□□□ -1.3
CPNE3-208ENST00000614678 GDF11O95390 407 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 CCDC129Q6ZRS4 1044 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 NKX2-3Q8TAU0 364 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 FAM151AQ8WW52 585 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 SLC10A4Q96EP9 437 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 MS4A4AQ96JQ5 239 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 PAG1Q9NWQ8 432 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 FLT1P17948 1338 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 FAM43AQ8N2R8 423 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 FAM163AQ96GL9 167 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-208ENST00000614678 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 CDH23Q9H251 3354 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 SALL3Q9BXA9 1300 aa6.95□□□□□ -1.3
CPNE3-208ENST00000614678 THSD7BQ9C0I4 1608 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 PPP1R12BO60237 982 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-208ENST00000614678 BRI3BPQ8WY22 251 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 CHMP4CQ96CF2 233 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 DYNLL2Q96FJ2 89 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 MRIQ9BWK5 157 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 IDI2Q9BXS1 227 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 IL25Q9H293 177 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 INCENPQ9NQS7 918 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 SUGT1Q9Y2Z0 365 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 PDE4AP27815 886 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 ERC1Q8IUD2 1116 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 OSBP2Q969R2 916 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 OSBPL5Q9H0X9 879 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-208ENST00000614678 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 ATP5JP18859 108 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 NF2P35240 595 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 NOGQ13253 232 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 MAP3K11Q16584 847 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 ARMC9Q7Z3E5 817 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 ZNF512BQ96KM6 892 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-208ENST00000614678 HAUS7Q99871 368 aa6.94□□□□□ -1.3
CPNE3-208ENST00000614678 M0R2C6 588 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 FAM83AQ86UY5 434 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 PDS5AQ29RF7 1337 aaKnown RBP6.93□□□□□ -1.3
CPNE3-208ENST00000614678 MBD4O95243 580 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 ECE1P42892 770 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 SUPT20HL1Q3ZLR7 823 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 ARHGAP39Q9C0H5 1083 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 ECHDC1Q9NTX5 307 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 TMOD2Q9NZR1 351 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 MAST3O60307 1309 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 TRIM75PA6NK02 468 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 FOXP2O15409 715 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 MAP2K2P36507 400 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 MAP3K9P80192 1104 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 TNFAIP1Q13829 316 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 VPS53Q5VIR6 699 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 ANKRD13AQ8IZ07 590 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 MYH1P12882 1939 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 CTGFP29279 349 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 ADD2P35612 726 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 MOGSQ13724 837 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 ZGPATQ8N5A5 531 aaKnown RBP6.93□□□□□ -1.3
CPNE3-208ENST00000614678 HHIPL1Q96JK4 782 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 PCDH10Q9P2E7 1040 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 TACC3Q9Y6A5 838 aa6.93□□□□□ -1.3
CPNE3-208ENST00000614678 FOCADQ5VW36 1801 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 PHIPQ8WWQ0 1821 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 CYP2C8P10632 490 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 IREB2P48200 963 aaKnown RBP6.92□□□□□ -1.3
CPNE3-208ENST00000614678 HSP90AB4PQ58FF6 505 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 SPTY2D1Q68D10 685 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-208ENST00000614678 ZHX2Q9Y6X8 837 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 DOCK3Q8IZD9 2030 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 MX1P20591 662 aa6.92□□□□□ -1.3
CPNE3-208ENST00000614678 TNNI2P48788 182 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms