RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 PICALMQ13492 652 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 POLA2Q14181 598 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 NOL9Q5SY16 702 aaKnown RBP26.71■■□□□ 1.87
CBWD1-223ENST00000613988 PI16Q6UXB8 463 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 TBC1D9Q6ZT07 1266 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 PPP4R2Q9NY27 417 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 GPR75-ASB3A0A0A6YYF3 556 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 UQCRFS1P1P0C7P4 283 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 GSTO1P78417 241 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 SH3BP5LQ7L8J4 393 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 ITPRIPQ8IWB1 547 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 SSH3Q8TE77 659 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 C1orf115Q9H7X2 142 aa26.71■■□□□ 1.87
CBWD1-223ENST00000613988 PDE4DIPQ5VU43 2346 aa26.7■■□□□ 1.87
CBWD1-223ENST00000613988 LDHCP07864 332 aa26.7■■□□□ 1.86
CBWD1-223ENST00000613988 ZNF384Q8TF68 577 aa26.7■■□□□ 1.86
CBWD1-223ENST00000613988 DDX4Q9NQI0 724 aaKnown RBP26.7■■□□□ 1.86
CBWD1-223ENST00000613988 RAI14Q9P0K7 980 aa26.7■■□□□ 1.86
CBWD1-223ENST00000613988 KCNH4Q9UQ05 1017 aa26.7■■□□□ 1.86
CBWD1-223ENST00000613988 RFX7Q2KHR2 1363 aa26.69■■□□□ 1.86
CBWD1-223ENST00000613988 SURF6O75683 361 aaKnown RBP26.69■■□□□ 1.86
CBWD1-223ENST00000613988 MCAMP43121 646 aa26.69■■□□□ 1.86
CBWD1-223ENST00000613988 NSUN4Q96CB9 384 aaKnown RBP26.69■■□□□ 1.86
CBWD1-223ENST00000613988 GPR108Q9NPR9 543 aa26.69■■□□□ 1.86
CBWD1-223ENST00000613988 CENPFP49454 3210 aa26.68■■□□□ 1.86
CBWD1-223ENST00000613988 ATRNL1Q5VV63 1379 aa26.68■■□□□ 1.86
CBWD1-223ENST00000613988 DDTLA6NHG4 134 aaPredicted RBP26.68■■□□□ 1.86
CBWD1-223ENST00000613988 PHF20L1A8MW92 1017 aa26.68■■□□□ 1.86
CBWD1-223ENST00000613988 ZBTB7BO15156 539 aaPredicted RBP26.68■■□□□ 1.86
CBWD1-223ENST00000613988 ANKRD23Q86SG2 305 aa26.68■■□□□ 1.86
CBWD1-223ENST00000613988 DOCK2Q92608 1830 aa26.68■■□□□ 1.86
CBWD1-223ENST00000613988 RLBP1P12271 317 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 RHBDL3P58872 404 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 KIF22Q14807 665 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 TNNI3KQ59H18 835 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 PICK1Q9NRD5 415 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 LRP2BPQ9P2M1 347 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 FPGT-TNNI3KV9GXZ4 949 aa26.67■■□□□ 1.86
CBWD1-223ENST00000613988 PDHXO00330 501 aa26.66■■□□□ 1.86
CBWD1-223ENST00000613988 MAP3K10Q02779 954 aa26.66■■□□□ 1.86
CBWD1-223ENST00000613988 CCDC158Q5M9N0 1113 aa26.66■■□□□ 1.86
CBWD1-223ENST00000613988 TTC39AQ5SRH9 613 aa26.66■■□□□ 1.86
CBWD1-223ENST00000613988 SCYL3Q8IZE3 742 aa26.66■■□□□ 1.86
CBWD1-223ENST00000613988 CXCL11O14625 94 aa26.65■■□□□ 1.86
CBWD1-223ENST00000613988 MAP4K4O95819 1239 aaPredicted RBP26.65■■□□□ 1.86
CBWD1-223ENST00000613988 C20orf194Q5TEA3 1177 aa26.65■■□□□ 1.86
CBWD1-223ENST00000613988 ZHX2Q9Y6X8 837 aa26.65■■□□□ 1.86
CBWD1-223ENST00000613988 LACTBP83111 547 aaPredicted RBP26.64■■□□□ 1.86
CBWD1-223ENST00000613988 ARMC5Q96C12 935 aa26.64■■□□□ 1.86
CBWD1-223ENST00000613988 CRBNQ96SW2 442 aa26.64■■□□□ 1.86
CBWD1-223ENST00000613988 DBNDD2Q9BQY9 259 aa26.64■■□□□ 1.86
CBWD1-223ENST00000613988 SNRKQ9NRH2 765 aa26.64■■□□□ 1.86
CBWD1-223ENST00000613988 NPM3O75607 178 aaKnown RBP26.63■■□□□ 1.85
CBWD1-223ENST00000613988 SLURP2P0DP57 97 aa26.63■■□□□ 1.85
CBWD1-223ENST00000613988 PTPRAP18433 802 aa26.63■■□□□ 1.85
CBWD1-223ENST00000613988 MOGSQ13724 837 aa26.63■■□□□ 1.85
CBWD1-223ENST00000613988 EXOC6Q8TAG9 804 aa26.63■■□□□ 1.85
CBWD1-223ENST00000613988 ARHGAP39Q9C0H5 1083 aa26.63■■□□□ 1.85
CBWD1-223ENST00000613988 CPA4Q9UI42 421 aa26.63■■□□□ 1.85
CBWD1-223ENST00000613988 NOP58Q9Y2X3 529 aaKnown RBP26.63■■□□□ 1.85
CBWD1-223ENST00000613988 CTNND1O60716 968 aaKnown RBP26.62■■□□□ 1.85
CBWD1-223ENST00000613988 C17orf99Q6UX52 265 aa26.62■■□□□ 1.85
CBWD1-223ENST00000613988 PTCH2Q9Y6C5 1203 aa26.62■■□□□ 1.85
CBWD1-223ENST00000613988 POTEFA5A3E0 1075 aa26.61■■□□□ 1.85
CBWD1-223ENST00000613988 NBPF11Q86T75 865 aa26.61■■□□□ 1.85
CBWD1-223ENST00000613988 NOL10Q9BSC4 688 aaKnown RBP26.61■■□□□ 1.85
CBWD1-223ENST00000613988 AAMPQ13685 434 aa26.6■■□□□ 1.85
CBWD1-223ENST00000613988 SLC9C1Q4G0N8 1177 aa26.6■■□□□ 1.85
CBWD1-223ENST00000613988 FASTKD5Q7L8L6 764 aaKnown RBP26.6■■□□□ 1.85
CBWD1-223ENST00000613988 AFG3L2Q9Y4W6 797 aa26.6■■□□□ 1.85
CBWD1-223ENST00000613988 TBC1D12O60347 775 aa26.59■■□□□ 1.85
CBWD1-223ENST00000613988 ECM2O94769 699 aaPredicted RBP26.59■■□□□ 1.85
CBWD1-223ENST00000613988 GNRH1P01148 92 aa26.59■■□□□ 1.85
CBWD1-223ENST00000613988 NAA16Q6N069 864 aaPredicted RBP26.59■■□□□ 1.85
CBWD1-223ENST00000613988 GPAT2Q6NUI2 795 aa26.59■■□□□ 1.85
CBWD1-223ENST00000613988 TEX11Q8IYF3 940 aa26.59■■□□□ 1.85
CBWD1-223ENST00000613988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.59■■□□□ 1.85
CBWD1-223ENST00000613988 A0A0G2JLL6 359 aaPredicted RBP26.58■■□□□ 1.85
CBWD1-223ENST00000613988 BAG3O95817 575 aa26.58■■□□□ 1.85
CBWD1-223ENST00000613988 PRRT2Q7Z6L0 340 aaPredicted RBP26.58■■□□□ 1.85
CBWD1-223ENST00000613988 PANK1Q8TE04 598 aa26.58■■□□□ 1.85
CBWD1-223ENST00000613988 ZNF512BQ96KM6 892 aaPredicted RBP26.58■■□□□ 1.85
CBWD1-223ENST00000613988 PARK7Q99497 189 aaKnown RBP26.58■■□□□ 1.85
CBWD1-223ENST00000613988 OSBPL5Q9H0X9 879 aaPredicted RBP26.58■■□□□ 1.85
CBWD1-223ENST00000613988 CYP2E1P05181 493 aaPredicted RBP26.58■■□□□ 1.84
CBWD1-223ENST00000613988 CEP85Q6P2H3 762 aa26.58■■□□□ 1.84
CBWD1-223ENST00000613988 SH3RF3Q8TEJ3 882 aaPredicted RBP26.58■■□□□ 1.84
CBWD1-223ENST00000613988 ZNF333Q96JL9 665 aa26.58■■□□□ 1.84
CBWD1-223ENST00000613988 TMEM106CQ9BVX2 250 aa26.58■■□□□ 1.84
CBWD1-223ENST00000613988 CCDC8Q9H0W5 538 aaPredicted RBP26.58■■□□□ 1.84
CBWD1-223ENST00000613988 KIAA0100Q14667 2235 aaKnown RBP26.57■■□□□ 1.84
CBWD1-223ENST00000613988 ZSWIM8A7E2V4 1837 aa26.57■■□□□ 1.84
CBWD1-223ENST00000613988 FAM196BA6NMK8 535 aa26.57■■□□□ 1.84
CBWD1-223ENST00000613988 GADL1Q6ZQY3 521 aa26.57■■□□□ 1.84
CBWD1-223ENST00000613988 AATFQ9NY61 560 aaKnown RBP eCLIP26.57■■□□□ 1.84
CBWD1-223ENST00000613988 DBNLQ9UJU6 430 aaKnown RBP26.57■■□□□ 1.84
CBWD1-223ENST00000613988 ADGRA2Q96PE1 1338 aa26.56■■□□□ 1.84
CBWD1-223ENST00000613988 DOCK1Q14185 1865 aa26.56■■□□□ 1.84
CBWD1-223ENST00000613988 CYP2C8P10632 490 aa26.56■■□□□ 1.84
CBWD1-223ENST00000613988 PSMC4P43686 418 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms