RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 NACAP1Q9BZK3 213 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 CTNNA3Q9UI47 895 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 HDAC9Q9UKV0 1011 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 TTF2Q9UNY4 1162 aaKnown RBP10.01□□□□□ -0.81
PSMB3-208ENST00000613870 PCDHAC2Q9Y5I4 1007 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 SLC4A4Q9Y6R1 1079 aa10.01□□□□□ -0.81
PSMB3-208ENST00000613870 ECM29Q5VYK3 1845 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 AKAP11Q9UKA4 1901 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 FAM155AB1AL88 458 aaPredicted RBP10□□□□□ -0.81
PSMB3-208ENST00000613870 HSPD1P10809 573 aaKnown RBP10□□□□□ -0.81
PSMB3-208ENST00000613870 HSPA8P11142 646 aaKnown RBP10□□□□□ -0.81
PSMB3-208ENST00000613870 GNAT2P19087 354 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 TDO2P48775 406 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 RBM25P49756 843 aaKnown RBP10□□□□□ -0.81
PSMB3-208ENST00000613870 LBX1P52954 281 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 DYNLL1P63167 89 aaKnown RBP10□□□□□ -0.81
PSMB3-208ENST00000613870 DIXDC1Q155Q3 683 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 GRIK5Q16478 980 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 VPS53Q5VIR6 699 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 RGMBQ6NW40 437 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 TNS4Q8IZW8 715 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 LCORLQ8N3X6 602 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 MTMR14Q8NCE2 650 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 CRNKL1Q9BZJ0 848 aaKnown RBP10□□□□□ -0.81
PSMB3-208ENST00000613870 PRDM10Q9NQV6 1147 aa10□□□□□ -0.81
PSMB3-208ENST00000613870 AATFQ9NY61 560 aaKnown RBP eCLIP10□□□□□ -0.81
PSMB3-208ENST00000613870 ZBTB22O15209 634 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 EPB41L2O43491 1005 aaKnown RBP9.99□□□□□ -0.81
PSMB3-208ENST00000613870 HSPA4P34932 840 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 USP5P45974 858 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 BECN1Q14457 450 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 TMED8Q6PL24 325 aaPredicted RBP9.99□□□□□ -0.81
PSMB3-208ENST00000613870 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 ADGRA1Q86SQ6 560 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 MAP4K1Q92918 833 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 PRMT6Q96LA8 375 aaPredicted RBP9.99□□□□□ -0.81
PSMB3-208ENST00000613870 STRBPQ96SI9 672 aaKnown RBP9.99□□□□□ -0.81
PSMB3-208ENST00000613870 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 NAPBQ9H115 298 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 SUGT1Q9Y2Z0 365 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 MROH7-TTC4A0A0A0MT08 1334 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
PSMB3-208ENST00000613870 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
PSMB3-208ENST00000613870 ZNF213O14771 459 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 SLC27A2O14975 620 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 PRKAB2O43741 272 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 IGSF3O75054 1194 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 ZNF157P51786 506 aaPredicted RBP9.98□□□□□ -0.81
PSMB3-208ENST00000613870 FKBP1BP68106 108 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 NOGQ13253 232 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 RABEP1Q15276 862 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 DLGAP5Q15398 846 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 IMMTQ16891 758 aaKnown RBP9.98□□□□□ -0.81
PSMB3-208ENST00000613870 CFAP100Q494V2 611 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 TEKT1Q969V4 418 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 PALD1Q9ULE6 856 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 PAPPA2Q9BXP8 1791 aa9.98□□□□□ -0.81
PSMB3-208ENST00000613870 SPDYE2BA6NHP3 402 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 MINDY4BA8MYZ0 360 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 SLC10A3P09131 477 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 SPDYE6P0CI01 402 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 PLCG2P16885 1265 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 PSMA5P28066 241 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 BTDP43251 543 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 ANAPC15P60006 121 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 HAND2P61296 217 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 KIF23Q02241 960 aaPredicted RBP9.97□□□□□ -0.81
PSMB3-208ENST00000613870 KRT32Q14532 448 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 APOBEC3FQ8IUX4 373 aaKnown RBP9.97□□□□□ -0.81
PSMB3-208ENST00000613870 HSCBQ8IWL3 235 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 AMOTL1Q8IY63 956 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 TEX11Q8IYF3 940 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 SH3RF3Q8TEJ3 882 aaPredicted RBP9.97□□□□□ -0.81
PSMB3-208ENST00000613870 ZNF384Q8TF68 577 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 CCDC102AQ96A19 550 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
PSMB3-208ENST00000613870 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 TSKSQ9UJT2 592 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 CASP8AP2Q9UKL3 1982 aa9.97□□□□□ -0.81
PSMB3-208ENST00000613870 MYH7P12883 1935 aa9.96□□□□□ -0.81
PSMB3-208ENST00000613870 CLRN2A0PK11 232 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 UBE2Q2LH0YL09 131 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 ST18O60284 1047 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 FGAP02671 866 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 CASTP20810 708 aaKnown RBP9.96□□□□□ -0.82
PSMB3-208ENST00000613870 CRKP46108 304 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 NEK4P51957 841 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 FGD1P98174 961 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 NECTIN1Q15223 517 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 RASAL3Q86YV0 1011 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 CERS3Q8IU89 383 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 IFNL3Q8IZI9 196 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 STK11IPQ8N1F8 1099 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 SDR42E1Q8WUS8 393 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 RIOK1Q9BRS2 568 aaKnown RBP9.96□□□□□ -0.82
PSMB3-208ENST00000613870 DEFB129Q9H1M3 183 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 TOMM22Q9NS69 142 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms