RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 VPS54Q9P1Q0 977 aa15.79■□□□□ 0.12
HPS1-215ENST00000613394 HPS5Q9UPZ3 1129 aa15.79■□□□□ 0.12
HPS1-215ENST00000613394 FAM208AQ9UK61 1670 aaKnown RBP15.78■□□□□ 0.12
HPS1-215ENST00000613394 GPS2Q13227 327 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 POSTNQ15063 836 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 NBPF11Q86T75 865 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 CADPS2Q86UW7 1296 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.12
HPS1-215ENST00000613394 ZSWIM5Q9P217 1185 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 SETD1AO15047 1707 aaKnown RBP15.78■□□□□ 0.12
HPS1-215ENST00000613394 CUTAO60888 179 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 CLCN6P51797 869 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 KIF5CO60282 957 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 SAMSN1Q9NSI8 373 aaKnown RBP15.78■□□□□ 0.12
HPS1-215ENST00000613394 PPP2R2CQ9Y2T4 447 aa15.78■□□□□ 0.12
HPS1-215ENST00000613394 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.12
HPS1-215ENST00000613394 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
HPS1-215ENST00000613394 IGHMBP2P38935 993 aaKnown RBP15.77■□□□□ 0.12
HPS1-215ENST00000613394 NYAP1Q6ZVC0 841 aa15.77■□□□□ 0.12
HPS1-215ENST00000613394 NOSTRINQ8IVI9 506 aa15.77■□□□□ 0.12
HPS1-215ENST00000613394 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.12
HPS1-215ENST00000613394 SDR42E1Q8WUS8 393 aa15.77■□□□□ 0.12
HPS1-215ENST00000613394 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.12
HPS1-215ENST00000613394 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.12
HPS1-215ENST00000613394 N4BP3O15049 544 aa15.77■□□□□ 0.11
HPS1-215ENST00000613394 ADD2P35612 726 aa15.77■□□□□ 0.11
HPS1-215ENST00000613394 PLIN2Q99541 437 aa15.77■□□□□ 0.11
HPS1-215ENST00000613394 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.11
HPS1-215ENST00000613394 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.11
HPS1-215ENST00000613394 GUCY1A2P33402 732 aa15.77■□□□□ 0.11
HPS1-215ENST00000613394 DZIP3Q86Y13 1208 aaKnown RBP15.77■□□□□ 0.11
HPS1-215ENST00000613394 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.77■□□□□ 0.11
HPS1-215ENST00000613394 OSBPL5Q9H0X9 879 aaPredicted RBP15.77■□□□□ 0.11
HPS1-215ENST00000613394 NEDD4P46934 1319 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 TRIM75PA6NK02 468 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 PHACTR2O75167 634 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 CIAO1O76071 339 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 RHOXF2BP0C7M4 288 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 UQCRFS1P1P0C7P4 283 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 CASP7P55210 303 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 PPP2R3AQ06190 1150 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 GABPB1Q06547 395 aaPredicted RBP15.76■□□□□ 0.11
HPS1-215ENST00000613394 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
HPS1-215ENST00000613394 CCDC102AQ96A19 550 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 EEF2KMTQ96G04 330 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 TMEM87BQ96K49 555 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 RHOXF2Q9BQY4 288 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 ARFGAP3Q9NP61 516 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 CEP131Q9UPN4 1083 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 V9GY48 417 aaPredicted RBP15.76■□□□□ 0.11
HPS1-215ENST00000613394 SH2B2O14492 632 aaPredicted RBP15.76■□□□□ 0.11
HPS1-215ENST00000613394 BCAMP50895 628 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 ZNF569Q5MCW4 686 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 NWD1Q149M9 1564 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 PSDA5PKW4 1024 aaPredicted RBP15.76■□□□□ 0.11
HPS1-215ENST00000613394 GRIN1Q05586 938 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 GPIHBP1Q8IV16 184 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
HPS1-215ENST00000613394 SPATA5Q8NB90 893 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 VPS16Q9H269 839 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 PCDHB6Q9Y5E3 794 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
HPS1-215ENST00000613394 CACNA1FO60840 1977 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 ARHGAP6O43182 974 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 IGSF22Q8N9C0 903 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 ACSBG1Q96GR2 724 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 KRT23Q9C075 422 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 RGPD1P0DJD0 1748 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 LMAN1P49257 510 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 IRX2Q9BZI1 471 aaPredicted RBP15.75■□□□□ 0.11
HPS1-215ENST00000613394 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 CTSWP56202 376 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 NLRP5P59047 1200 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 HSP90B2PQ58FF3 399 aa15.75■□□□□ 0.11
HPS1-215ENST00000613394 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
HPS1-215ENST00000613394 PCCAP05165 728 aaPredicted RBP15.74■□□□□ 0.11
HPS1-215ENST00000613394 FAM193AP78312 1265 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 SPECC1LQ69YQ0 1117 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
HPS1-215ENST00000613394 KLHL34Q8N239 644 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 NEK11Q8NG66 645 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 SEC31BQ9NQW1 1179 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 FMN2Q9NZ56 1722 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 PDE8BO95263 885 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 CCDC175P0C221 793 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 PDE4BQ07343 736 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
HPS1-215ENST00000613394 GOLGA6L1Q8N7Z2 621 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 TTLL11Q8NHH1 800 aa15.74■□□□□ 0.11
HPS1-215ENST00000613394 IPO7O95373 1038 aaKnown RBP15.73■□□□□ 0.11
HPS1-215ENST00000613394 CATIPQ7Z7H3 387 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 MAN1B1Q9UKM7 699 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
HPS1-215ENST00000613394 MCM7P33993 719 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms