RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 HSF2BPO75031 334 aa16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 ZNF75DP51815 510 aa16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 RNF187Q5TA31 235 aaPredicted RBP16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 CAPZA3Q96KX2 299 aa16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 TPCN1Q9ULQ1 816 aa16.08■□□□□ 0.16
PCDHB16-201ENST00000609684 FANCCQ00597 558 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 MAPK8IP1Q9UQF2 711 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 MLH3Q9UHC1 1453 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 RBM26Q5T8P6 1007 aaKnown RBP16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 CCDC91Q7Z6B0 441 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 IGSF22Q8N9C0 903 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 VPS16Q9H269 839 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 LRRC24Q50LG9 513 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 AKNAD1Q5T1N1 836 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
PCDHB16-201ENST00000609684 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 PDE4DQ08499 809 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 HAUS7Q99871 368 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 STAP2Q9UGK3 403 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 PRR36Q9H6K5 1346 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 USP6P35125 1406 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 PHACTR2O75167 634 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 MPHOSPH6Q99547 160 aaKnown RBP16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 FAM107BQ9H098 131 aa16.06■□□□□ 0.16
PCDHB16-201ENST00000609684 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 MICALCLQ6ZW33 695 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 TRAF5O00463 557 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 CCNT1O60563 726 aaKnown RBP16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 NLRP12P59046 1061 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 TBC1D8BQ0IIM8 1120 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 CCDC65Q8IXS2 484 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 MLKLQ8NB16 471 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 PLS1Q14651 629 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 NOC4LQ9BVI4 516 aaKnown RBP16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
PCDHB16-201ENST00000609684 SYNRGQ9UMZ2 1314 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 TXKP42681 527 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 ARHGEF25Q86VW2 580 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 TCHPQ9BT92 498 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 CCDC122Q5T0U0 273 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 ZBTB38Q8NAP3 1195 aaPredicted RBP16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 NAP1L4Q99733 375 aaKnown RBP16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 RHOXF2BP0C7M4 288 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 JDP2Q8WYK2 163 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 RHOXF2Q9BQY4 288 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 NFE2L3Q9Y4A8 694 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 MAPKAPK5Q8IW41 473 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 LSG1Q9H089 658 aaKnown RBP16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
PCDHB16-201ENST00000609684 PDE6AP16499 860 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 PPARAQ07869 468 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 RGS12O14924 1447 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 PCCAP05165 728 aaPredicted RBP16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 PPP1R2P41236 205 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 DCAF17Q5H9S7 520 aaPredicted RBP16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 LMBR1Q8WVP7 490 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 PRPHP41219 470 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 POSTNQ15063 836 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 FCHSD1Q86WN1 690 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 DBNLQ9UJU6 430 aaKnown RBP16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 RPS8P62241 208 aaKnown RBP16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 FAM47AQ5JRC9 791 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
PCDHB16-201ENST00000609684 PFKFB2O60825 505 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 TFAP4Q01664 338 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 ZNF654Q8IZM8 581 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 CSGALNACT2Q8N6G5 542 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 SYNCQ9H7C4 482 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 KIF1BO60333 1816 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 RPL13P26373 211 aaKnown RBP16.02■□□□□ 0.16
PCDHB16-201ENST00000609684 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms