RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 CCL5P13501 91 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 CTGFP29279 349 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 MTX1Q13505 466 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 ZNF341Q9BYN7 854 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 RNF208Q9H0X6 261 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 COG6Q9Y2V7 657 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 MAST3O60307 1309 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 ADGRA2Q96PE1 1338 aa16.85■□□□□ 0.29
CTSA-218ENST00000607814 PDHXO00330 501 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 PHKA1P46020 1223 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 ATP8B2P98198 1209 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 SLAIN1Q8ND83 568 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 CPA4Q9UI42 421 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 KCNH4Q9UQ05 1017 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 MYPNQ86TC9 1320 aa16.84■□□□□ 0.29
CTSA-218ENST00000607814 CACNB3P54284 484 aa16.83■□□□□ 0.28
CTSA-218ENST00000607814 APOBEC3HQ6NTF7 200 aaKnown RBP16.83■□□□□ 0.28
CTSA-218ENST00000607814 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.83■□□□□ 0.28
CTSA-218ENST00000607814 NEUROD6Q96NK8 337 aa16.83■□□□□ 0.28
CTSA-218ENST00000607814 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
CTSA-218ENST00000607814 FARP2O94887 1054 aaPredicted RBP16.82■□□□□ 0.28
CTSA-218ENST00000607814 FCGRTP55899 365 aa16.82■□□□□ 0.28
CTSA-218ENST00000607814 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTSA-218ENST00000607814 HHIPL2Q6UWX4 724 aa16.82■□□□□ 0.28
CTSA-218ENST00000607814 U2AF1L4Q8WU68 220 aaKnown RBP16.82■□□□□ 0.28
CTSA-218ENST00000607814 PARK7Q99497 189 aaKnown RBP16.82■□□□□ 0.28
CTSA-218ENST00000607814 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
CTSA-218ENST00000607814 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
CTSA-218ENST00000607814 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
CTSA-218ENST00000607814 SURF6O75683 361 aaKnown RBP16.81■□□□□ 0.28
CTSA-218ENST00000607814 SGPL1O95470 568 aa16.81■□□□□ 0.28
CTSA-218ENST00000607814 POLA2Q14181 598 aa16.81■□□□□ 0.28
CTSA-218ENST00000607814 CCDC102BQ68D86 513 aa16.81■□□□□ 0.28
CTSA-218ENST00000607814 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
CTSA-218ENST00000607814 BCRP11274 1271 aa16.8■□□□□ 0.28
CTSA-218ENST00000607814 INPP5BP32019 993 aa16.8■□□□□ 0.28
CTSA-218ENST00000607814 PRKCZQ05513 592 aa16.8■□□□□ 0.28
CTSA-218ENST00000607814 MOGSQ13724 837 aa16.8■□□□□ 0.28
CTSA-218ENST00000607814 NOL9Q5SY16 702 aaKnown RBP16.8■□□□□ 0.28
CTSA-218ENST00000607814 FAM151AQ8WW52 585 aa16.8■□□□□ 0.28
CTSA-218ENST00000607814 CXCL11O14625 94 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 EVI5O60447 810 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 OS9Q13438 667 aaPredicted RBP16.79■□□□□ 0.28
CTSA-218ENST00000607814 MVPQ14764 893 aaKnown RBP16.79■□□□□ 0.28
CTSA-218ENST00000607814 GPR153Q6NV75 609 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 CEP85Q6P2H3 762 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 MIGA2Q7L4E1 593 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 SSH3Q8TE77 659 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 PXYLP1Q8TE99 480 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
CTSA-218ENST00000607814 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
CTSA-218ENST00000607814 PRDX5P30044 214 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
CTSA-218ENST00000607814 IRF5Q13568 498 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 DIXDC1Q155Q3 683 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 PI16Q6UXB8 463 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.28
CTSA-218ENST00000607814 UNC93B1Q9H1C4 597 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 GNL3LQ9NVN8 582 aaKnown RBP16.77■□□□□ 0.28
CTSA-218ENST00000607814 AKAP2Q9Y2D5 859 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 SLC45A1Q9Y2W3 748 aa16.77■□□□□ 0.28
CTSA-218ENST00000607814 MGAMO43451 1857 aa16.77■□□□□ 0.27
CTSA-218ENST00000607814 APBB1O00213 710 aa16.76■□□□□ 0.27
CTSA-218ENST00000607814 ADCY3O60266 1144 aa16.76■□□□□ 0.27
CTSA-218ENST00000607814 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
CTSA-218ENST00000607814 WDR66Q8TBY9 1149 aa16.76■□□□□ 0.27
CTSA-218ENST00000607814 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
CTSA-218ENST00000607814 BMP8BP34820 402 aa16.75■□□□□ 0.27
CTSA-218ENST00000607814 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
CTSA-218ENST00000607814 TBC1D9Q6ZT07 1266 aa16.75■□□□□ 0.27
CTSA-218ENST00000607814 PAK6Q9NQU5 681 aaPredicted RBP16.75■□□□□ 0.27
CTSA-218ENST00000607814 ABCF2Q9UG63 623 aa16.75■□□□□ 0.27
CTSA-218ENST00000607814 DENND2AQ9ULE3 1009 aa16.75■□□□□ 0.27
CTSA-218ENST00000607814 A0A0G2JLL6 359 aaPredicted RBP16.74■□□□□ 0.27
CTSA-218ENST00000607814 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
CTSA-218ENST00000607814 CYP2C8P10632 490 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 MS4A1P11836 297 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 FLT3LGP49771 235 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 PRRT2Q7Z6L0 340 aaPredicted RBP16.74■□□□□ 0.27
CTSA-218ENST00000607814 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 DBNDD2Q9BQY9 259 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 CRISPLD2Q9H0B8 497 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
CTSA-218ENST00000607814 SNRKQ9NRH2 765 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 GABRQQ9UN88 632 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 UNC80Q8N2C7 3258 aa16.74■□□□□ 0.27
CTSA-218ENST00000607814 AK9Q5TCS8 1911 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 SOX1O00570 391 aaPredicted RBP16.73■□□□□ 0.27
CTSA-218ENST00000607814 INHAP05111 366 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 LDHBP07195 334 aaKnown RBP16.73■□□□□ 0.27
CTSA-218ENST00000607814 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 TLR7Q9NYK1 1049 aaKnown RBP16.73■□□□□ 0.27
CTSA-218ENST00000607814 HMG20BQ9P0W2 317 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
CTSA-218ENST00000607814 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
CTSA-218ENST00000607814 TCP10Q12799 353 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms