RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 CTCFP49711 727 aaPredicted RBP12.24□□□□□ -0.45
CTSA-215ENST00000607187 CACNB3P54284 484 aa12.24□□□□□ -0.45
CTSA-215ENST00000607187 PDE4DQ08499 809 aa12.24□□□□□ -0.45
CTSA-215ENST00000607187 PRKG1Q13976 671 aa12.24□□□□□ -0.45
CTSA-215ENST00000607187 CDC42EP5Q6NZY7 148 aa12.24□□□□□ -0.45
CTSA-215ENST00000607187 DZIP1Q86YF9 867 aaKnown RBP12.24□□□□□ -0.45
CTSA-215ENST00000607187 FAM163AQ96GL9 167 aaPredicted RBP12.24□□□□□ -0.45
CTSA-215ENST00000607187 TMEM39BQ9GZU3 492 aa12.24□□□□□ -0.45
CTSA-215ENST00000607187 FZD1Q9UP38 647 aa12.24□□□□□ -0.45
CTSA-215ENST00000607187 UNCXA6NJT0 531 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 USP2O75604 605 aaPredicted RBP12.23□□□□□ -0.45
CTSA-215ENST00000607187 KIF23Q02241 960 aaPredicted RBP12.23□□□□□ -0.45
CTSA-215ENST00000607187 MECOMQ03112 1051 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 TTC39AQ5SRH9 613 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 TBC1D9Q6ZT07 1266 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 ZNF384Q8TF68 577 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 BEGAINQ9BUH8 593 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 CCDC8Q9H0W5 538 aaPredicted RBP12.23□□□□□ -0.45
CTSA-215ENST00000607187 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
CTSA-215ENST00000607187 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
CTSA-215ENST00000607187 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
CTSA-215ENST00000607187 CASP8AP2Q9UKL3 1982 aa12.22□□□□□ -0.45
CTSA-215ENST00000607187 CA12O43570 354 aa12.22□□□□□ -0.45
CTSA-215ENST00000607187 HSPA8P11142 646 aaKnown RBP12.22□□□□□ -0.45
CTSA-215ENST00000607187 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
CTSA-215ENST00000607187 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
CTSA-215ENST00000607187 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
CTSA-215ENST00000607187 AACSQ86V21 672 aa12.22□□□□□ -0.45
CTSA-215ENST00000607187 KIF1BPQ96EK5 621 aa12.22□□□□□ -0.45
CTSA-215ENST00000607187 PRDM10Q9NQV6 1147 aa12.22□□□□□ -0.45
CTSA-215ENST00000607187 USP40Q9NVE5 1235 aa12.22□□□□□ -0.45
CTSA-215ENST00000607187 CDK5RAP2Q96SN8 1893 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 DOCK2Q92608 1830 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 MROH7-TTC4A0A0A0MT08 1334 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 RAB11FIP3O75154 756 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 LBX1P52954 281 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 NFIAQ12857 509 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.45
CTSA-215ENST00000607187 CSRNP1Q96S65 589 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 IL1RAPL2Q9NP60 686 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 SNRKQ9NRH2 765 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
CTSA-215ENST00000607187 GPR75-ASB3A0A0A6YYF3 556 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 CYP2E1P05181 493 aaPredicted RBP12.2□□□□□ -0.46
CTSA-215ENST00000607187 GSTO1P78417 241 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 TCP10Q12799 353 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 SPRYD7Q5W111 196 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 CLASRPQ8N2M8 674 aaKnown RBP12.2□□□□□ -0.46
CTSA-215ENST00000607187 FAM151AQ8WW52 585 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 SLC10A4Q96EP9 437 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 CLMNQ96JQ2 1002 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 IDI2Q9BXS1 227 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 RAI14Q9P0K7 980 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
CTSA-215ENST00000607187 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 FOCADQ5VW36 1801 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 APBB1O00213 710 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 IGSF3O75054 1194 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 LDHCP07864 332 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 BTDP43251 543 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 ZAP70P43403 619 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 RHBDL3P58872 404 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
CTSA-215ENST00000607187 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTSA-215ENST00000607187 HOOK2Q96ED9 719 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 SAGE1Q9NXZ1 904 aa12.19□□□□□ -0.46
CTSA-215ENST00000607187 ENTPD3O75355 529 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
CTSA-215ENST00000607187 ZBTB48P10074 688 aaPredicted RBP12.18□□□□□ -0.46
CTSA-215ENST00000607187 TM4SF4P48230 202 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 RGS3P49796 1198 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
CTSA-215ENST00000607187 ZFPM1Q8IX07 1006 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 PIH1D3Q9NQM4 214 aaKnown RBP12.18□□□□□ -0.46
CTSA-215ENST00000607187 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
CTSA-215ENST00000607187 MAP4K4O95819 1239 aaPredicted RBP12.17□□□□□ -0.46
CTSA-215ENST00000607187 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
CTSA-215ENST00000607187 VGLL4Q14135 290 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 DCAF15Q66K64 600 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 NAA16Q6N069 864 aaPredicted RBP12.17□□□□□ -0.46
CTSA-215ENST00000607187 MIGA2Q7L4E1 593 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.17□□□□□ -0.46
CTSA-215ENST00000607187 DCTPP1Q9H773 170 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
CTSA-215ENST00000607187 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 MYH7P12883 1935 aa12.17□□□□□ -0.46
CTSA-215ENST00000607187 TRPA1O75762 1119 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 GJA5P36382 358 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 SH3BP5LQ7L8J4 393 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 ZNF341Q9BYN7 854 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms