RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ADGRA2Q96PE1 1338 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 E9PSI1 815 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 TNPO2O14787 897 aaKnown RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 ADCY3O60266 1144 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 EVI5O60447 810 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 CTNND1O60716 968 aaKnown RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 SGPL1O95470 568 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 MYCP01106 439 aaPredicted RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 BCRP11274 1271 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 INPP5BP32019 993 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 IL15P40933 162 aaPredicted RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 ATP2B3Q16720 1220 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 CDC42EP5Q6NZY7 148 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 MIGA2Q7L4E1 593 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 ZSCAN29Q8IWY8 852 aaPredicted RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 SCYL3Q8IZE3 742 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 ANKRD44Q8N8A2 993 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 ANKLE1Q8NAG6 615 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 U2AF1L4Q8WU68 220 aaKnown RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 IDI2Q9BXS1 227 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 ARHGAP39Q9C0H5 1083 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 USP40Q9NVE5 1235 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
CUX1-220ENST00000607092 DAGLAQ9Y4D2 1042 aa7.82□□□□□ -1.16
CUX1-220ENST00000607092 BRCA2P51587 3418 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 A0A0G2JLL6 359 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 IGSF3O75054 1194 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 TFRCP02786 760 aaKnown RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 LDHCP07864 332 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 CT47B1P0C2W7 299 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 UBTFL1P0CB47 393 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 GCLCP48506 637 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 GSTO1P78417 241 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 PRKCZQ05513 592 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 MTFR1Q15390 333 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 GRIK5Q16478 980 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 ALDH1L2Q3SY69 923 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 GPR153Q6NV75 609 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 NECAB2Q7Z6G3 386 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 PRRT2Q7Z6L0 340 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 UBE2Q1Q7Z7E8 422 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 DZIP1Q86YF9 867 aaKnown RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 PROCA1Q8NCQ7 364 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 FAM163AQ96GL9 167 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 ZBTB47Q9UFB7 747 aaPredicted RBP7.81□□□□□ -1.16
CUX1-220ENST00000607092 AKAP2Q9Y2D5 859 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 ZHX2Q9Y6X8 837 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 A0A0C4DFX4 3053 aa7.81□□□□□ -1.16
CUX1-220ENST00000607092 ZBTB7BO15156 539 aaPredicted RBP7.8□□□□□ -1.16
CUX1-220ENST00000607092 TBC1D12O60347 775 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 FLT3LGP49771 235 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 CAP1Q01518 475 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 MAP3K10Q02779 954 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 TCP10Q12799 353 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 MVPQ14764 893 aaKnown RBP7.8□□□□□ -1.16
CUX1-220ENST00000607092 FAM110CQ1W6H9 321 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 GADL1Q6ZQY3 521 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 TRMT44Q8IYL2 757 aaKnown RBP7.8□□□□□ -1.16
CUX1-220ENST00000607092 MRPL50Q8N5N7 158 aaKnown RBP7.8□□□□□ -1.16
CUX1-220ENST00000607092 SPRYD3Q8NCJ5 442 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 SHISA4Q96DD7 197 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 USP44Q9H0E7 712 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 RBM27Q9P2N5 1060 aaKnown RBP7.8□□□□□ -1.16
CUX1-220ENST00000607092 AGTPBP1Q9UPW5 1226 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
CUX1-220ENST00000607092 GAKO14976 1311 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 INHAP05111 366 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 CYP2C8P10632 490 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 PTPRAP18433 802 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 PRDX5P30044 214 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 RGS3P49796 1198 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 NFIAQ12857 509 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 MOGSQ13724 837 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 DIXDC1Q155Q3 683 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 CCDC184Q52MB2 194 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 GPAT2Q6NUI2 795 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 NOL10Q9BSC4 688 aaKnown RBP7.79□□□□□ -1.16
CUX1-220ENST00000607092 API5Q9BZZ5 524 aaKnown RBP7.79□□□□□ -1.16
CUX1-220ENST00000607092 OSBPL5Q9H0X9 879 aaPredicted RBP7.79□□□□□ -1.16
CUX1-220ENST00000607092 AS3MTQ9HBK9 375 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
CUX1-220ENST00000607092 GINM1Q9NU53 330 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 FAM198AQ9UFP1 575 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 AFG3L2Q9Y4W6 797 aa7.79□□□□□ -1.16
CUX1-220ENST00000607092 AK9Q5TCS8 1911 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 PHF20L1A8MW92 1017 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 HMGCRP04035 888 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 BMP8BP34820 402 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 RFX5P48382 616 aaPredicted RBP7.78□□□□□ -1.16
CUX1-220ENST00000607092 ATG9AQ7Z3C6 839 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 FAM9BQ8IZU0 186 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 KLHDC4Q8TBB5 520 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 GTF3C2Q8WUA4 911 aaPredicted RBP7.78□□□□□ -1.16
CUX1-220ENST00000607092 DEFB118Q96PH6 123 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 NBPF3Q9H094 633 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 CRISPLD2Q9H0B8 497 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 UNC93B1Q9H1C4 597 aa7.78□□□□□ -1.16
CUX1-220ENST00000607092 DHX36Q9H2U1 1008 aaKnown RBP7.78□□□□□ -1.16
CUX1-220ENST00000607092 PRO3102Q9H379 93 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms