RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 CLSTN2Q9H4D0 955 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 FAM217BQ9NTX9 383 aaPredicted RBP18.51■□□□□ 0.55
CTSA-214ENST00000606788 ZMYM6O95789 1325 aa18.51■□□□□ 0.55
CTSA-214ENST00000606788 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 CNBD1Q8NA66 436 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 ZNF804BA4D1E1 1349 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 ERICH2A1L162 156 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 EVCP57679 992 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 SDF4Q9BRK5 362 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 NYXQ9GZU5 481 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 CBX8Q9HC52 389 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 RCOR1Q9UKL0 485 aa18.5■□□□□ 0.55
CTSA-214ENST00000606788 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
CTSA-214ENST00000606788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
CTSA-214ENST00000606788 KINO60870 393 aaKnown RBP18.49■□□□□ 0.55
CTSA-214ENST00000606788 NDUFA8P51970 172 aa18.49■□□□□ 0.55
CTSA-214ENST00000606788 CLIC6Q96NY7 704 aa18.49■□□□□ 0.55
CTSA-214ENST00000606788 CPLX2Q6PUV4 134 aaKnown RBP18.48■□□□□ 0.55
CTSA-214ENST00000606788 QTRT2Q9H974 415 aaKnown RBP18.48■□□□□ 0.55
CTSA-214ENST00000606788 DDX19AQ9NUU7 478 aaKnown RBP18.48■□□□□ 0.55
CTSA-214ENST00000606788 C11orf57Q6ZUT1 292 aaPredicted RBP18.48■□□□□ 0.55
CTSA-214ENST00000606788 RIOK1Q9BRS2 568 aaKnown RBP18.48■□□□□ 0.55
CTSA-214ENST00000606788 TNKSO95271 1327 aa18.48■□□□□ 0.55
CTSA-214ENST00000606788 DRC7Q8IY82 874 aa18.48■□□□□ 0.55
CTSA-214ENST00000606788 TMEM87BQ96K49 555 aa18.48■□□□□ 0.55
CTSA-214ENST00000606788 BTBD18B2RXH4 712 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 TM4SF1P30408 202 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 ZNF165P49910 485 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 RTN1Q16799 776 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 ATRNO75882 1429 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 SPTLC2O15270 562 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 SSRP1Q08945 709 aaKnown RBP18.47■□□□□ 0.55
CTSA-214ENST00000606788 NR5A1Q13285 461 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 DZIP1Q86YF9 867 aaKnown RBP18.47■□□□□ 0.55
CTSA-214ENST00000606788 LINC00301Q8NCQ3 95 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 KRT23Q9C075 422 aa18.47■□□□□ 0.55
CTSA-214ENST00000606788 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
CTSA-214ENST00000606788 TRIM29Q14134 588 aa18.46■□□□□ 0.55
CTSA-214ENST00000606788 SART3Q15020 963 aaKnown RBP18.46■□□□□ 0.55
CTSA-214ENST00000606788 NTRK3Q16288 839 aa18.46■□□□□ 0.55
CTSA-214ENST00000606788 NSUN4Q96CB9 384 aaKnown RBP18.46■□□□□ 0.55
CTSA-214ENST00000606788 SNW1Q13573 536 aaKnown RBP18.46■□□□□ 0.55
CTSA-214ENST00000606788 TICAM2Q86XR7 235 aa18.46■□□□□ 0.55
CTSA-214ENST00000606788 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
CTSA-214ENST00000606788 CCDC39Q9UFE4 941 aa18.46■□□□□ 0.55
CTSA-214ENST00000606788 USP17L8P0C7I0 530 aa18.46■□□□□ 0.54
CTSA-214ENST00000606788 ALX1Q15699 326 aa18.46■□□□□ 0.54
CTSA-214ENST00000606788 ZNF654Q8IZM8 581 aa18.46■□□□□ 0.54
CTSA-214ENST00000606788 WDHD1O75717 1129 aaPredicted RBP18.45■□□□□ 0.54
CTSA-214ENST00000606788 FBXO33Q7Z6M2 555 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 MCM9Q9NXL9 1143 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 SAP30BPQ9UHR5 308 aaKnown RBP18.45■□□□□ 0.54
CTSA-214ENST00000606788 NOL7Q9UMY1 257 aaKnown RBP18.45■□□□□ 0.54
CTSA-214ENST00000606788 ZKSCAN5Q9Y2L8 839 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 BAZ2AQ9UIF9 1905 aaKnown RBP18.45■□□□□ 0.54
CTSA-214ENST00000606788 RTL9Q8NET4 1388 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 GNAT2P19087 354 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 SLC10A5Q5PT55 438 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 ANO1Q5XXA6 986 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 CTR9Q6PD62 1173 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 OXER1Q8TDS5 423 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 STAG1Q8WVM7 1258 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
CTSA-214ENST00000606788 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 TRIM5Q9C035 493 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 CNNM2Q9H8M5 875 aa18.45■□□□□ 0.54
CTSA-214ENST00000606788 FAM205CA6NFA0 338 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 RC3H1Q5TC82 1133 aaKnown RBP18.44■□□□□ 0.54
CTSA-214ENST00000606788 PRR5LQ6MZQ0 368 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 PNPLA7Q6ZV29 1317 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 LRP5O75197 1615 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 MRPS27Q92552 414 aaKnown RBP18.44■□□□□ 0.54
CTSA-214ENST00000606788 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
CTSA-214ENST00000606788 RIMBP2O15034 1052 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
CTSA-214ENST00000606788 R3HCC1Q9Y3T6 440 aaKnown RBP18.43■□□□□ 0.54
CTSA-214ENST00000606788 BTAF1O14981 1849 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 F8W031 263 aaPredicted RBP18.43■□□□□ 0.54
CTSA-214ENST00000606788 CDKL5O76039 1030 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 FBXL16Q8N461 479 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 ESR2Q92731 530 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 RTEL1Q9NZ71 1219 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 UFL1O94874 794 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 FAM160A1Q05DH4 1040 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
CTSA-214ENST00000606788 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
CTSA-214ENST00000606788 IFIT1BQ5T764 474 aaKnown RBP18.42■□□□□ 0.54
CTSA-214ENST00000606788 DIS3L2Q8IYB7 885 aaKnown RBP18.42■□□□□ 0.54
CTSA-214ENST00000606788 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
CTSA-214ENST00000606788 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
CTSA-214ENST00000606788 GRIN1Q05586 938 aa18.42■□□□□ 0.54
CTSA-214ENST00000606788 SGMS1Q86VZ5 419 aa18.42■□□□□ 0.54
CTSA-214ENST00000606788 SERPINB2P05120 415 aa18.41■□□□□ 0.54
CTSA-214ENST00000606788 NOM1Q5C9Z4 860 aaKnown RBP18.41■□□□□ 0.54
CTSA-214ENST00000606788 DCP1AQ9NPI6 582 aaPredicted RBP18.41■□□□□ 0.54
CTSA-214ENST00000606788 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms