RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PIM2Q9P1W9 311 aa25.41■■□□□ 1.66
USP6NL-204ENST00000606752 KIF13BQ9NQT8 1826 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 CYP2D7A0A087X1C5 515 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 RRP12Q5JTH9 1297 aaKnown RBP25.4■■□□□ 1.66
USP6NL-204ENST00000606752 IGDCC4Q8TDY8 1250 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 PSMD1Q99460 953 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 SH2B2O14492 632 aaPredicted RBP25.4■■□□□ 1.66
USP6NL-204ENST00000606752 FGRP09769 529 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 LLPHQ9BRT6 129 aaKnown RBP25.4■■□□□ 1.66
USP6NL-204ENST00000606752 MTA3Q9BTC8 594 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 KCNQ5Q9NR82 932 aa25.4■■□□□ 1.66
USP6NL-204ENST00000606752 TTF2Q9UNY4 1162 aaKnown RBP25.4■■□□□ 1.66
USP6NL-204ENST00000606752 MYH2Q9UKX2 1941 aa25.39■■□□□ 1.66
USP6NL-204ENST00000606752 SOGA3Q5TF21 947 aa25.39■■□□□ 1.65
USP6NL-204ENST00000606752 STK11IPQ8N1F8 1099 aa25.39■■□□□ 1.65
USP6NL-204ENST00000606752 MXD3Q9BW11 206 aa25.39■■□□□ 1.65
USP6NL-204ENST00000606752 MCM9Q9NXL9 1143 aa25.39■■□□□ 1.65
USP6NL-204ENST00000606752 BRPF3Q9ULD4 1205 aa25.39■■□□□ 1.65
USP6NL-204ENST00000606752 NAP1L2Q9ULW6 460 aaPredicted RBP25.39■■□□□ 1.65
USP6NL-204ENST00000606752 WDR33Q9C0J8 1336 aaKnown RBP25.38■■□□□ 1.65
USP6NL-204ENST00000606752 PPIP5K2O43314 1243 aa25.38■■□□□ 1.65
USP6NL-204ENST00000606752 SYT1P21579 422 aa25.38■■□□□ 1.65
USP6NL-204ENST00000606752 TGFBRAP1Q8WUH2 860 aa25.38■■□□□ 1.65
USP6NL-204ENST00000606752 ESR2Q92731 530 aa25.38■■□□□ 1.65
USP6NL-204ENST00000606752 DAGLAQ9Y4D2 1042 aa25.38■■□□□ 1.65
USP6NL-204ENST00000606752 KLF18A0A0U1RQI7 1052 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 USP17L3A6NCW0 530 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 USP17L4A6NCW7 530 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 F8W031 263 aaPredicted RBP25.37■■□□□ 1.65
USP6NL-204ENST00000606752 SMIM22K7EJ46 135 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 SLC3A2P08195 630 aaKnown RBP25.37■■□□□ 1.65
USP6NL-204ENST00000606752 PDIA4P13667 645 aaKnown RBP25.37■■□□□ 1.65
USP6NL-204ENST00000606752 RHBDL3P58872 404 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 USP17L1Q7RTZ2 530 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 SGIP1Q9BQI5 828 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 IFIT3O14879 490 aaKnown RBP25.37■■□□□ 1.65
USP6NL-204ENST00000606752 LIFRP42702 1097 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 TMEM67Q5HYA8 995 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 DACT2Q5SW24 774 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 TEX11Q8IYF3 940 aa25.37■■□□□ 1.65
USP6NL-204ENST00000606752 BAZ2AQ9UIF9 1905 aaKnown RBP25.36■■□□□ 1.65
USP6NL-204ENST00000606752 STX6O43752 255 aa25.36■■□□□ 1.65
USP6NL-204ENST00000606752 USP17L8P0C7I0 530 aa25.36■■□□□ 1.65
USP6NL-204ENST00000606752 CCT2P78371 535 aaKnown RBP25.36■■□□□ 1.65
USP6NL-204ENST00000606752 SART3Q15020 963 aaKnown RBP25.36■■□□□ 1.65
USP6NL-204ENST00000606752 HHIPL2Q6UWX4 724 aa25.36■■□□□ 1.65
USP6NL-204ENST00000606752 SGMS1Q86VZ5 419 aa25.36■■□□□ 1.65
USP6NL-204ENST00000606752 PDCP20941 246 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 C12orf60Q5U649 245 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 AMOTL1Q8IY63 956 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 MRIQ9BWK5 157 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 VPS33BQ9H267 617 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 LY9Q9HBG7 655 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 DTNBO60941 627 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 BAG4O95429 457 aaKnown RBP25.35■■□□□ 1.65
USP6NL-204ENST00000606752 CYP2D6P10635 497 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 SMARCC2Q8TAQ2 1214 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.35■■□□□ 1.65
USP6NL-204ENST00000606752 CD2APQ9Y5K6 639 aa25.35■■□□□ 1.65
USP6NL-204ENST00000606752 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
USP6NL-204ENST00000606752 GOLGA8BA8MQT2 603 aa25.34■■□□□ 1.65
USP6NL-204ENST00000606752 ORC4O43929 436 aa25.34■■□□□ 1.65
USP6NL-204ENST00000606752 DALRD3Q5D0E6 543 aaKnown RBP25.34■■□□□ 1.65
USP6NL-204ENST00000606752 LARP1BQ659C4 914 aaKnown RBP25.34■■□□□ 1.65
USP6NL-204ENST00000606752 TEKT1Q969V4 418 aa25.34■■□□□ 1.65
USP6NL-204ENST00000606752 HPS5Q9UPZ3 1129 aa25.34■■□□□ 1.65
USP6NL-204ENST00000606752 ERICH2A1L162 156 aa25.33■■□□□ 1.65
USP6NL-204ENST00000606752 DDX11L8A8MPP1 907 aa25.33■■□□□ 1.65
USP6NL-204ENST00000606752 DHX16O60231 1041 aaKnown RBP25.33■■□□□ 1.65
USP6NL-204ENST00000606752 JAK2O60674 1132 aa25.33■■□□□ 1.65
USP6NL-204ENST00000606752 PDE4BQ07343 736 aa25.33■■□□□ 1.65
USP6NL-204ENST00000606752 FOXD4L5Q5VV16 416 aaPredicted RBP25.33■■□□□ 1.65
USP6NL-204ENST00000606752 MAPKAPK5Q8IW41 473 aa25.33■■□□□ 1.65
USP6NL-204ENST00000606752 TMTC2Q8N394 836 aa25.33■■□□□ 1.65
USP6NL-204ENST00000606752 NSUN7Q8NE18 718 aaKnown RBP25.33■■□□□ 1.65
USP6NL-204ENST00000606752 FOXD4L4Q8WXT5 416 aaPredicted RBP25.33■■□□□ 1.65
USP6NL-204ENST00000606752 NCOA5Q9HCD5 579 aaKnown RBP25.33■■□□□ 1.65
USP6NL-204ENST00000606752 PPP1R1BQ9UD71 204 aaPredicted RBP25.33■■□□□ 1.65
USP6NL-204ENST00000606752 CTDNEP1O95476 244 aa25.33■■□□□ 1.64
USP6NL-204ENST00000606752 SCNN1DP51172 638 aa25.33■■□□□ 1.64
USP6NL-204ENST00000606752 NFXL1Q6ZNB6 911 aa25.33■■□□□ 1.64
USP6NL-204ENST00000606752 ZSCAN22P10073 491 aaPredicted RBP25.32■■□□□ 1.64
USP6NL-204ENST00000606752 HMGN5P82970 282 aaKnown RBP25.32■■□□□ 1.64
USP6NL-204ENST00000606752 HDLBPQ00341 1268 aaKnown RBP25.32■■□□□ 1.64
USP6NL-204ENST00000606752 EVX2Q03828 476 aa25.32■■□□□ 1.64
USP6NL-204ENST00000606752 APOA5Q6Q788 366 aa25.32■■□□□ 1.64
USP6NL-204ENST00000606752 UBAC1Q9BSL1 405 aa25.32■■□□□ 1.64
USP6NL-204ENST00000606752 SENP2Q9HC62 589 aa25.32■■□□□ 1.64
USP6NL-204ENST00000606752 YDJCA8MPS7 323 aa25.31■■□□□ 1.64
USP6NL-204ENST00000606752 RANBP6O60518 1105 aaKnown RBP25.31■■□□□ 1.64
USP6NL-204ENST00000606752 PRDM1O75626 825 aa25.31■■□□□ 1.64
USP6NL-204ENST00000606752 NT5C2P49902 561 aa25.31■■□□□ 1.64
USP6NL-204ENST00000606752 WTAPQ15007 396 aa25.31■■□□□ 1.64
USP6NL-204ENST00000606752 ZKSCAN3Q9BRR0 538 aa25.31■■□□□ 1.64
USP6NL-204ENST00000606752 ZNF277Q9NRM2 450 aaPredicted RBP25.31■■□□□ 1.64
USP6NL-204ENST00000606752 POLR3DP05423 398 aaPredicted RBP25.3■■□□□ 1.64
USP6NL-204ENST00000606752 PTGER2P43116 358 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 CRKP46108 304 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 KIAA0825Q8IV33 1275 aa25.3■■□□□ 1.64
USP6NL-204ENST00000606752 LARGE2Q8N3Y3 721 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms