RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
FGFR2-222ENST00000604236 RIPOR2Q9Y4F9 1068 aa17.75■□□□□ 0.43
FGFR2-222ENST00000604236 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
FGFR2-222ENST00000604236 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
FGFR2-222ENST00000604236 NAT10Q9H0A0 1025 aaKnown RBP17.75■□□□□ 0.43
FGFR2-222ENST00000604236 KDM3BQ7LBC6 1761 aa17.75■□□□□ 0.43
FGFR2-222ENST00000604236 MED1Q15648 1581 aaPredicted RBP17.75■□□□□ 0.43
FGFR2-222ENST00000604236 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.43
FGFR2-222ENST00000604236 NLRP5P59047 1200 aa17.75■□□□□ 0.43
FGFR2-222ENST00000604236 MAPKAPK5Q8IW41 473 aa17.75■□□□□ 0.43
FGFR2-222ENST00000604236 LPIN2Q92539 896 aa17.75■□□□□ 0.43
FGFR2-222ENST00000604236 ZFP91Q96JP5 570 aaPredicted RBP17.75■□□□□ 0.43
FGFR2-222ENST00000604236 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
FGFR2-222ENST00000604236 ADKP55263 362 aaKnown RBP17.74■□□□□ 0.43
FGFR2-222ENST00000604236 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
FGFR2-222ENST00000604236 ZHX3Q9H4I2 956 aa17.74■□□□□ 0.43
FGFR2-222ENST00000604236 URI1O94763 535 aaPredicted RBP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 SFPQP23246 707 aaKnown RBP eCLIP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 CCT6AP40227 531 aaKnown RBP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 UBASH3AP57075 661 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 SYT10Q6XYQ8 523 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 DESI2Q9BSY9 194 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 TEX13AQ9BXU3 409 aaPredicted RBP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 PCDHB6Q9Y5E3 794 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 MPHOSPH10O00566 681 aaKnown RBP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 PLEKHA8P1O95397 391 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
FGFR2-222ENST00000604236 ZMYND15Q9H091 742 aa17.73■□□□□ 0.43
FGFR2-222ENST00000604236 NRDCO43847 1150 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 ZFYP08048 801 aaPredicted RBP17.72■□□□□ 0.43
FGFR2-222ENST00000604236 FKBP15Q5T1M5 1219 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 PIK3AP1Q6ZUJ8 805 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 EPC1Q9H2F5 836 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 RFC4P35249 363 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 TXNRD3Q86VQ6 643 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 SERTAD1Q9UHV2 236 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 RGPD5Q99666 1765 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 LMO7Q8WWI1 1683 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 ZNF622Q969S3 477 aaKnown RBP eCLIP17.72■□□□□ 0.43
FGFR2-222ENST00000604236 STRBPQ96SI9 672 aaKnown RBP17.72■□□□□ 0.43
FGFR2-222ENST00000604236 EPB41L4AQ9HCS5 686 aaPredicted RBP17.72■□□□□ 0.43
FGFR2-222ENST00000604236 FANCLQ9NW38 375 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 DNAI1Q9UI46 699 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 UTYO14607 1347 aa17.72■□□□□ 0.43
FGFR2-222ENST00000604236 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
FGFR2-222ENST00000604236 CLEC10AQ8IUN9 316 aa17.71■□□□□ 0.43
FGFR2-222ENST00000604236 EPSTI1Q96J88 318 aa17.71■□□□□ 0.43
FGFR2-222ENST00000604236 NLRP3Q96P20 1036 aa17.71■□□□□ 0.43
FGFR2-222ENST00000604236 TNKSO95271 1327 aa17.71■□□□□ 0.43
FGFR2-222ENST00000604236 VEGFAP15692 232 aaPredicted RBP17.71■□□□□ 0.43
FGFR2-222ENST00000604236 ZSCAN29Q8IWY8 852 aaPredicted RBP17.71■□□□□ 0.43
FGFR2-222ENST00000604236 LINC00301Q8NCQ3 95 aa17.71■□□□□ 0.43
FGFR2-222ENST00000604236 EXOSC10Q01780 885 aaKnown RBP17.71■□□□□ 0.42
FGFR2-222ENST00000604236 HEATR3Q7Z4Q2 680 aa17.71■□□□□ 0.42
FGFR2-222ENST00000604236 NOC3LQ8WTT2 800 aaKnown RBP17.71■□□□□ 0.42
FGFR2-222ENST00000604236 POLD4Q9HCU8 107 aa17.71■□□□□ 0.42
FGFR2-222ENST00000604236 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
FGFR2-222ENST00000604236 AKNAD1Q5T1N1 836 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 PCDHA5Q9Y5H7 936 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 ERICH4A6NGS2 130 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 ILDR1Q86SU0 546 aaPredicted RBP17.7■□□□□ 0.42
FGFR2-222ENST00000604236 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 TGFBRAP1Q8WUH2 860 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 CDC5LQ99459 802 aaKnown RBP17.7■□□□□ 0.42
FGFR2-222ENST00000604236 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 LZTFL1Q9NQ48 299 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 KCNH3Q9ULD8 1083 aa17.7■□□□□ 0.42
FGFR2-222ENST00000604236 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
FGFR2-222ENST00000604236 IL6STP40189 918 aaPredicted RBP17.69■□□□□ 0.42
FGFR2-222ENST00000604236 KIF23Q02241 960 aaPredicted RBP17.69■□□□□ 0.42
FGFR2-222ENST00000604236 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 HPS5Q9UPZ3 1129 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 CCNL1Q9UK58 526 aaPredicted RBP17.69■□□□□ 0.42
FGFR2-222ENST00000604236 SOS2Q07890 1332 aaPredicted RBP17.69■□□□□ 0.42
FGFR2-222ENST00000604236 DPF2Q92785 391 aa17.69■□□□□ 0.42
FGFR2-222ENST00000604236 SLIT3O75094 1523 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 USP17L3A6NCW0 530 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 USP17L4A6NCW7 530 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 CDKL5O76039 1030 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 UQCRFS1P1P0C7P4 283 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 PPARAQ07869 468 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 USP17L1Q7RTZ2 530 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 KIAA1468Q9P260 1216 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
FGFR2-222ENST00000604236 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
FGFR2-222ENST00000604236 MB21D2Q8IYB1 491 aaPredicted RBP17.68■□□□□ 0.42
FGFR2-222ENST00000604236 CTCFLQ8NI51 663 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms