RNA–Protein interactions for RNA: ENST00000602397.5

STRN4-224, Transcript of striatin 4, human

TSL 3

Gene STRN4, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-224	ENST00000602397	VEGFB	P49765	207 aa		18.34	■□□□□ 0.53
STRN4-224	ENST00000602397	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.34	■□□□□ 0.53
STRN4-224	ENST00000602397	MKRN1	Q9UHC7	482 aa	Known RBP	18.34	■□□□□ 0.53
STRN4-224	ENST00000602397	NOL10	Q9BSC4	688 aa	Known RBP	18.33	■□□□□ 0.52
STRN4-224	ENST00000602397	THSD7B	Q9C0I4	1608 aa		18.33	■□□□□ 0.52
STRN4-224	ENST00000602397	FLT1	P17948	1338 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	OTOF	Q9HC10	1997 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	MAGEB6P1	A0A0J9YX57	407 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	UNCX	A6NJT0	531 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	FAM155A	B1AL88	458 aa	Predicted RBP	18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	RNF113A	O15541	343 aa	Known RBP	18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	PICALM	Q13492	652 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	ZSCAN25	Q6NSZ9	544 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	RGMB	Q6NW40	437 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	ARMC9	Q7Z3E5	817 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	JMY	Q8N9B5	988 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	TGFBRAP1	Q8WUH2	860 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	PUS7L	Q9H0K6	701 aa	Known RBP	18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	ANGEL1	Q9UNK9	670 aa	Known RBP	18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	SIPA1L1	O43166	1804 aa		18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	DDX60L	Q5H9U9	1706 aa	Known RBP	18.32	■□□□□ 0.52
STRN4-224	ENST00000602397	PPP1R12B	O60237	982 aa	Predicted RBP	18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	ZFY	P08048	801 aa	Predicted RBP	18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	PRKG1	Q13976	671 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	ERICH6B	Q5W0A0	696 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	CYP4F22	Q6NT55	531 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	TICAM2	Q86XR7	235 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	LCORL	Q8N3X6	602 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	OSBP2	Q969R2	916 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	EVI5L	Q96CN4	794 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	CAPNS2	Q96L46	248 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	ZNF112	Q9UJU3	913 aa		18.31	■□□□□ 0.52
STRN4-224	ENST00000602397	WDR33	Q9C0J8	1336 aa	Known RBP	18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	NEFL	P07196	543 aa		18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	SLURP2	P0DP57	97 aa		18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	METTL16	Q86W50	562 aa	Known RBP	18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	MAPKAPK5	Q8IW41	473 aa		18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	APPBP2	Q92624	585 aa		18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	HOOK2	Q96ED9	719 aa		18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	CLMN	Q96JQ2	1002 aa		18.3	■□□□□ 0.52
STRN4-224	ENST00000602397	AK9	Q5TCS8	1911 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	PHF20L1	A8MW92	1017 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	TBC1D12	O60347	775 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	MBD4	O95243	580 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	SLC10A3	P09131	477 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	IREB2	P48200	963 aa	Known RBP	18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	TTLL12	Q14166	644 aa	Predicted RBP	18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	ZMYM1	Q5SVZ6	1142 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	MIGA2	Q7L4E1	593 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	RASAL3	Q86YV0	1011 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	CSRNP1	Q96S65	589 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	ARMT1	Q9H993	441 aa		18.29	■□□□□ 0.52
STRN4-224	ENST00000602397	ECE1	P42892	770 aa		18.28	■□□□□ 0.52
STRN4-224	ENST00000602397	DCAF15	Q66K64	600 aa		18.28	■□□□□ 0.52
STRN4-224	ENST00000602397	STRBP	Q96SI9	672 aa	Known RBP	18.28	■□□□□ 0.52
STRN4-224	ENST00000602397	FSD1	Q9BTV5	496 aa		18.28	■□□□□ 0.52
STRN4-224	ENST00000602397	DHX36	Q9H2U1	1008 aa	Known RBP	18.28	■□□□□ 0.52
STRN4-224	ENST00000602397	PCNT	O95613	3336 aa		18.28	■□□□□ 0.52
STRN4-224	ENST00000602397	MYH1	P12882	1939 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	PRKAB2	O43741	272 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	GSPT1	P15170	499 aa	Known RBP	18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	ZNF157	P51786	506 aa	Predicted RBP	18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	MAP3K9	P80192	1104 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	ANKRD13A	Q8IZ07	590 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	CCDC102A	Q96A19	550 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	ZIC5	Q96T25	663 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	ZNF341	Q9BYN7	854 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.27	■□□□□ 0.52
STRN4-224	ENST00000602397	PALD1	Q9ULE6	856 aa		18.27	■□□□□ 0.52
STRN4-224	ENST00000602397		M0R2C6	588 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	AOC2	O75106	756 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	INPP5B	P32019	993 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	VGLL4	Q14135	290 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	TTC22	Q5TAA0	569 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	SDR42E1	Q8WUS8	393 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	CCDC136	Q96JN2	1154 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	SEC62	Q99442	399 aa	Known RBP	18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	DNAJC18	Q9H819	358 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	PI4KB	Q9UBF8	816 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	SNCAIP	Q9Y6H5	919 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	LAMB1	P07942	1786 aa		18.26	■□□□□ 0.51
STRN4-224	ENST00000602397	NAV1	Q8NEY1	1877 aa		18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	GJA5	P36382	358 aa		18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	MAP2K2	P36507	400 aa		18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	USP5	P45974	858 aa		18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	WRNIP1	Q96S55	665 aa		18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	ATP8A2	Q9NTI2	1148 aa		18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	SAP30BP	Q9UHR5	308 aa	Known RBP	18.25	■□□□□ 0.51
STRN4-224	ENST00000602397	GSG1L2	A8MUP6	293 aa		18.24	■□□□□ 0.51
STRN4-224	ENST00000602397	NOG	Q13253	232 aa		18.24	■□□□□ 0.51
STRN4-224	ENST00000602397	RRP1B	Q14684	758 aa	Known RBP	18.24	■□□□□ 0.51
STRN4-224	ENST00000602397	NOL9	Q5SY16	702 aa	Known RBP	18.24	■□□□□ 0.51
STRN4-224	ENST00000602397	SPRYD7	Q5W111	196 aa		18.24	■□□□□ 0.51
STRN4-224	ENST00000602397	SKAP1	Q86WV1	359 aa		18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms