RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	TEX11	Q8IYF3	940 aa		32.58	■■■□□ 2.81
USF2-215	ENST00000602164	HOOK2	Q96ED9	719 aa		32.58	■■■□□ 2.81
USF2-215	ENST00000602164	GPATCH3	Q96I76	525 aa		32.58	■■■□□ 2.81
USF2-215	ENST00000602164	NOL10	Q9BSC4	688 aa	Known RBP	32.58	■■■□□ 2.81
USF2-215	ENST00000602164	TCRBV5S4A2T	A0A5A2	114 aa		32.57	■■■□□ 2.8
USF2-215	ENST00000602164	DDTL	A6NHG4	134 aa	Predicted RBP	32.57	■■■□□ 2.8
USF2-215	ENST00000602164	PLCG2	P16885	1265 aa		32.57	■■■□□ 2.8
USF2-215	ENST00000602164	DYNLL1	P63167	89 aa	Known RBP	32.57	■■■□□ 2.8
USF2-215	ENST00000602164	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.57	■■■□□ 2.8
USF2-215	ENST00000602164	ANKRD13A	Q8IZ07	590 aa		32.57	■■■□□ 2.8
USF2-215	ENST00000602164	TTC41P	Q6P2S7	1318 aa		32.56	■■■□□ 2.8
USF2-215	ENST00000602164	KIF23	Q02241	960 aa	Predicted RBP	32.56	■■■□□ 2.8
USF2-215	ENST00000602164	MAP2K1	Q02750	393 aa	Predicted RBP	32.56	■■■□□ 2.8
USF2-215	ENST00000602164	SLC9C2	Q5TAH2	1124 aa		32.56	■■■□□ 2.8
USF2-215	ENST00000602164	MIGA1	Q8NAN2	632 aa		32.56	■■■□□ 2.8
USF2-215	ENST00000602164	PI4K2B	Q8TCG2	481 aa		32.56	■■■□□ 2.8
USF2-215	ENST00000602164	LAMB1	P07942	1786 aa		32.55	■■■□□ 2.8
USF2-215	ENST00000602164	DCAF15	Q66K64	600 aa		32.55	■■■□□ 2.8
USF2-215	ENST00000602164	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.55	■■■□□ 2.8
USF2-215	ENST00000602164	AK9	Q5TCS8	1911 aa		32.55	■■■□□ 2.8
USF2-215	ENST00000602164	MYH7	P12883	1935 aa		32.54	■■■□□ 2.8
USF2-215	ENST00000602164	MIGA2	Q7L4E1	593 aa		32.54	■■■□□ 2.8
USF2-215	ENST00000602164	CSRNP1	Q96S65	589 aa		32.54	■■■□□ 2.8
USF2-215	ENST00000602164	RIOK1	Q9BRS2	568 aa	Known RBP	32.54	■■■□□ 2.8
USF2-215	ENST00000602164	ZNF532	Q9HCE3	1301 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	MX1	P20591	662 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	MAP3K9	P80192	1104 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	VGLL4	Q14135	290 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	SPRYD7	Q5W111	196 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	SLC10A4	Q96EP9	437 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	ZNF341	Q9BYN7	854 aa		32.53	■■■□□ 2.8
USF2-215	ENST00000602164	ADD2	P35612	726 aa		32.52	■■■□□ 2.8
USF2-215	ENST00000602164	MAP3K10	Q02779	954 aa		32.52	■■■□□ 2.8
USF2-215	ENST00000602164	ZNF112	Q9UJU3	913 aa		32.52	■■■□□ 2.8
USF2-215	ENST00000602164	FLT1	P17948	1338 aa		32.51	■■■□□ 2.8
USF2-215	ENST00000602164	SIPA1L1	O43166	1804 aa		32.51	■■■□□ 2.8
USF2-215	ENST00000602164	FOXN1	O15353	648 aa		32.51	■■■□□ 2.79
USF2-215	ENST00000602164	CERS3	Q8IU89	383 aa		32.51	■■■□□ 2.79
USF2-215	ENST00000602164	WNK4	Q96J92	1243 aa		32.51	■■■□□ 2.79
USF2-215	ENST00000602164	WRNIP1	Q96S55	665 aa		32.51	■■■□□ 2.79
USF2-215	ENST00000602164	CHGB	P05060	677 aa		32.5	■■■□□ 2.79
USF2-215	ENST00000602164	GJA5	P36382	358 aa		32.5	■■■□□ 2.79
USF2-215	ENST00000602164	SLFNL1	Q499Z3	407 aa		32.5	■■■□□ 2.79
USF2-215	ENST00000602164	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	32.5	■■■□□ 2.79
USF2-215	ENST00000602164	TGFBRAP1	Q8WUH2	860 aa		32.5	■■■□□ 2.79
USF2-215	ENST00000602164	SNCAIP	Q9Y6H5	919 aa		32.5	■■■□□ 2.79
USF2-215	ENST00000602164	SLURP2	P0DP57	97 aa		32.49	■■■□□ 2.79
USF2-215	ENST00000602164	MAPKAPK5	Q8IW41	473 aa		32.49	■■■□□ 2.79
USF2-215	ENST00000602164	ELP3	Q9H9T3	547 aa		32.49	■■■□□ 2.79
USF2-215	ENST00000602164	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.49	■■■□□ 2.79
USF2-215	ENST00000602164	STAP2	Q9UGK3	403 aa		32.49	■■■□□ 2.79
USF2-215	ENST00000602164	DDX60L	Q5H9U9	1706 aa	Known RBP	32.48	■■■□□ 2.79
USF2-215	ENST00000602164	ERC2	O15083	957 aa		32.48	■■■□□ 2.79
USF2-215	ENST00000602164	GLRX3	O76003	335 aa	Known RBP	32.48	■■■□□ 2.79
USF2-215	ENST00000602164	ZBTB48	P10074	688 aa	Predicted RBP	32.48	■■■□□ 2.79
USF2-215	ENST00000602164	NUCB1	Q02818	461 aa		32.48	■■■□□ 2.79
USF2-215	ENST00000602164	MKRN3	Q13064	507 aa	Known RBP	32.48	■■■□□ 2.79
USF2-215	ENST00000602164	KBTBD3	Q8NAB2	608 aa		32.48	■■■□□ 2.79
USF2-215	ENST00000602164	ZKSCAN4	Q969J2	545 aa	Predicted RBP	32.48	■■■□□ 2.79
USF2-215	ENST00000602164	LNPK	Q9C0E8	428 aa		32.48	■■■□□ 2.79
USF2-215	ENST00000602164	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
USF2-215	ENST00000602164	INPP5B	P32019	993 aa		32.47	■■■□□ 2.79
USF2-215	ENST00000602164	MAGEB6P1	A0A0J9YX57	407 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	PHF20L1	A8MW92	1017 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	UBE3C	Q15386	1083 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	B4GALNT3	Q6L9W6	998 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	CNKSR2	Q8WXI2	1034 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	AIDA	Q96BJ3	306 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.46	■■■□□ 2.79
USF2-215	ENST00000602164	CSAD	Q9Y600	493 aa		32.46	■■■□□ 2.79
USF2-215	ENST00000602164	PDE1A	P54750	535 aa		32.45	■■■□□ 2.79
USF2-215	ENST00000602164	CHD1L	Q86WJ1	897 aa		32.45	■■■□□ 2.79
USF2-215	ENST00000602164	REM2	Q8IYK8	340 aa	Predicted RBP	32.45	■■■□□ 2.79
USF2-215	ENST00000602164	OPTN	Q96CV9	577 aa		32.45	■■■□□ 2.79
USF2-215	ENST00000602164	SPDYE5	A6NIY4	337 aa		32.44	■■■□□ 2.78
USF2-215	ENST00000602164	TBC1D12	O60347	775 aa		32.44	■■■□□ 2.78
USF2-215	ENST00000602164	NOL9	Q5SY16	702 aa	Known RBP	32.44	■■■□□ 2.78
USF2-215	ENST00000602164	LCORL	Q8N3X6	602 aa		32.44	■■■□□ 2.78
USF2-215	ENST00000602164	DHX36	Q9H2U1	1008 aa	Known RBP	32.43	■■■□□ 2.78
USF2-215	ENST00000602164	HSPA8	P11142	646 aa	Known RBP	32.42	■■■□□ 2.78
USF2-215	ENST00000602164	TM4SF4	P48230	202 aa		32.42	■■■□□ 2.78
USF2-215	ENST00000602164	ZSCAN25	Q6NSZ9	544 aa		32.42	■■■□□ 2.78
USF2-215	ENST00000602164	NAV1	Q8NEY1	1877 aa		32.42	■■■□□ 2.78
USF2-215	ENST00000602164	MYH1	P12882	1939 aa		32.41	■■■□□ 2.78
USF2-215	ENST00000602164	FAM196B	A6NMK8	535 aa		32.41	■■■□□ 2.78
USF2-215	ENST00000602164	BEGAIN	Q9BUH8	593 aa		32.41	■■■□□ 2.78
USF2-215	ENST00000602164	PALD1	Q9ULE6	856 aa		32.41	■■■□□ 2.78
USF2-215	ENST00000602164	CA12	O43570	354 aa		32.4	■■■□□ 2.78
USF2-215	ENST00000602164	MBD4	O95243	580 aa		32.4	■■■□□ 2.78
USF2-215	ENST00000602164	USP5	P45974	858 aa		32.4	■■■□□ 2.78
USF2-215	ENST00000602164	CTCF	P49711	727 aa	Predicted RBP	32.4	■■■□□ 2.78
USF2-215	ENST00000602164	METTL16	Q86W50	562 aa	Known RBP	32.4	■■■□□ 2.78
USF2-215	ENST00000602164	ERO1B	Q86YB8	467 aa		32.4	■■■□□ 2.78
USF2-215	ENST00000602164	ARMT1	Q9H993	441 aa		32.4	■■■□□ 2.78
USF2-215	ENST00000602164	SAP30BP	Q9UHR5	308 aa	Known RBP	32.4	■■■□□ 2.78
USF2-215	ENST00000602164	DOCK1	Q14185	1865 aa		32.4	■■■□□ 2.78
USF2-215	ENST00000602164	MANSC4	A6NHS7	340 aa	Predicted RBP	32.39	■■■□□ 2.78
USF2-215	ENST00000602164	OTUD5	Q96G74	571 aa		32.39	■■■□□ 2.78
USF2-215	ENST00000602164	CRNKL1	Q9BZJ0	848 aa	Known RBP	32.39	■■■□□ 2.78
USF2-215	ENST00000602164	DNAJC18	Q9H819	358 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms