RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
RPS28-204ENST00000602140 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 RBBP6Q7Z6E9 1792 aaKnown RBP16.26■□□□□ 0.19
RPS28-204ENST00000602140 MROH7-TTC4A0A0A0MT08 1334 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 MYCP01106 439 aaPredicted RBP16.26■□□□□ 0.19
RPS28-204ENST00000602140 GNRH1P01148 92 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 MECOMQ03112 1051 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 PICALMQ13492 652 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 SH3TC2Q8TF17 1288 aa16.26■□□□□ 0.19
RPS28-204ENST00000602140 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
RPS28-204ENST00000602140 DOCK2Q92608 1830 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 PNMA6EA0A0J9YXQ4 647 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 DDTLA6NHG4 134 aaPredicted RBP16.25■□□□□ 0.19
RPS28-204ENST00000602140 CXCL11O14625 94 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 SLURP2P0DP57 97 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 CTGFP29279 349 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 PSMC4P43686 418 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 G3BP1Q13283 466 aaKnown RBP eCLIP16.25■□□□□ 0.19
RPS28-204ENST00000602140 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 PI16Q6UXB8 463 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 PICK1Q9NRD5 415 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 ZHX2Q9Y6X8 837 aa16.25■□□□□ 0.19
RPS28-204ENST00000602140 ADGRA2Q96PE1 1338 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 GPR75-ASB3A0A0A6YYF3 556 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 PTPRAP18433 802 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 PRMT2P55345 433 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 MAP3K10Q02779 954 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 GPAT2Q6NUI2 795 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 TBC1D9Q6ZT07 1266 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 SPATA5Q8NB90 893 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 ZNF384Q8TF68 577 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
RPS28-204ENST00000602140 KIAA0100Q14667 2235 aaKnown RBP16.23■□□□□ 0.19
RPS28-204ENST00000602140 CYP2C8P10632 490 aa16.23■□□□□ 0.19
RPS28-204ENST00000602140 RHBDL3P58872 404 aa16.23■□□□□ 0.19
RPS28-204ENST00000602140 PARK7Q99497 189 aaKnown RBP16.23■□□□□ 0.19
RPS28-204ENST00000602140 SRRDQ9UH36 339 aa16.23■□□□□ 0.19
RPS28-204ENST00000602140 AFG3L2Q9Y4W6 797 aa16.23■□□□□ 0.19
RPS28-204ENST00000602140 A0A0G2JLL6 359 aaPredicted RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 LDHCP07864 332 aa16.22■□□□□ 0.19
RPS28-204ENST00000602140 HOXD10P28358 340 aa16.22■□□□□ 0.19
RPS28-204ENST00000602140 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 GSTO1P78417 241 aa16.22■□□□□ 0.19
RPS28-204ENST00000602140 FASTKD5Q7L8L6 764 aaKnown RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 PRRT2Q7Z6L0 340 aaPredicted RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 TMEM57Q8N5G2 664 aa16.22■□□□□ 0.19
RPS28-204ENST00000602140 NSUN4Q96CB9 384 aaKnown RBP16.22■□□□□ 0.19
RPS28-204ENST00000602140 RAI14Q9P0K7 980 aa16.22■□□□□ 0.19
RPS28-204ENST00000602140 OSBPP22059 807 aa16.21■□□□□ 0.19
RPS28-204ENST00000602140 MCAMP43121 646 aa16.21■□□□□ 0.19
RPS28-204ENST00000602140 ZKSCAN2Q63HK3 967 aa16.21■□□□□ 0.19
RPS28-204ENST00000602140 GADL1Q6ZQY3 521 aa16.21■□□□□ 0.19
RPS28-204ENST00000602140 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
RPS28-204ENST00000602140 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
RPS28-204ENST00000602140 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
RPS28-204ENST00000602140 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
RPS28-204ENST00000602140 BCRP11274 1271 aa16.2■□□□□ 0.18
RPS28-204ENST00000602140 CCDC84Q86UT8 332 aaPredicted RBP16.2■□□□□ 0.18
RPS28-204ENST00000602140 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
RPS28-204ENST00000602140 GCC1Q96CN9 775 aa16.2■□□□□ 0.18
RPS28-204ENST00000602140 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
RPS28-204ENST00000602140 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
RPS28-204ENST00000602140 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
RPS28-204ENST00000602140 TBC1D12O60347 775 aa16.19■□□□□ 0.18
RPS28-204ENST00000602140 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
RPS28-204ENST00000602140 FCGRTP55899 365 aa16.19■□□□□ 0.18
RPS28-204ENST00000602140 MTFR1Q15390 333 aa16.19■□□□□ 0.18
RPS28-204ENST00000602140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.18
RPS28-204ENST00000602140 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 GRK4P32298 578 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 PRKCZQ05513 592 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
RPS28-204ENST00000602140 POLA2Q14181 598 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 TEX11Q8IYF3 940 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
RPS28-204ENST00000602140 SNRKQ9NRH2 765 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 SLC45A1Q9Y2W3 748 aa16.18■□□□□ 0.18
RPS28-204ENST00000602140 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
RPS28-204ENST00000602140 TNNI3KQ59H18 835 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 DBNDD2Q9BQY9 259 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 NOL10Q9BSC4 688 aaKnown RBP16.17■□□□□ 0.18
RPS28-204ENST00000602140 C1orf115Q9H7X2 142 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 GPR108Q9NPR9 543 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 PCDH10Q9P2E7 1040 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 FPGT-TNNI3KV9GXZ4 949 aa16.17■□□□□ 0.18
RPS28-204ENST00000602140 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
RPS28-204ENST00000602140 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
RPS28-204ENST00000602140 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
RPS28-204ENST00000602140 NAA16Q6N069 864 aaPredicted RBP16.16■□□□□ 0.18
RPS28-204ENST00000602140 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
RPS28-204ENST00000602140 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
RPS28-204ENST00000602140 SMCR8Q8TEV9 937 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms