RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 NAPBQ9H115 298 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 NMRK2Q9NPI5 230 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 GGA3Q9NZ52 723 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 NAV1Q8NEY1 1877 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 ALX1Q15699 326 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 EAPPQ56P03 285 aaPredicted RBP24.43■■□□□ 1.5
PNKP-215ENST00000600910 PNMA8AQ86V59 439 aaPredicted RBP24.43■■□□□ 1.5
PNKP-215ENST00000600910 USP26Q9BXU7 913 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 RBM8AQ9Y5S9 174 aaKnown RBP24.43■■□□□ 1.5
PNKP-215ENST00000600910 BAZ2AQ9UIF9 1905 aaKnown RBP24.42■■□□□ 1.5
PNKP-215ENST00000600910 FKBP1CQ5VVH2 108 aa24.42■■□□□ 1.5
PNKP-215ENST00000600910 OSBPL5Q9H0X9 879 aaPredicted RBP24.42■■□□□ 1.5
PNKP-215ENST00000600910 MCM9Q9NXL9 1143 aa24.42■■□□□ 1.5
PNKP-215ENST00000600910 SAP30BPQ9UHR5 308 aaKnown RBP24.42■■□□□ 1.5
PNKP-215ENST00000600910 SCAF8Q9UPN6 1271 aaKnown RBP24.42■■□□□ 1.5
PNKP-215ENST00000600910 U3KPZ7 1027 aaPredicted RBP24.42■■□□□ 1.5
PNKP-215ENST00000600910 ENTPD3O75355 529 aa24.41■■□□□ 1.5
PNKP-215ENST00000600910 NPM3O75607 178 aaKnown RBP24.41■■□□□ 1.5
PNKP-215ENST00000600910 ZMYM6O95789 1325 aa24.41■■□□□ 1.5
PNKP-215ENST00000600910 ZFPM1Q8IX07 1006 aa24.41■■□□□ 1.5
PNKP-215ENST00000600910 DDX60LQ5H9U9 1706 aaKnown RBP24.4■■□□□ 1.5
PNKP-215ENST00000600910 CNTNAP1P78357 1384 aa24.4■■□□□ 1.5
PNKP-215ENST00000600910 EPB41L2O43491 1005 aaKnown RBP24.4■■□□□ 1.5
PNKP-215ENST00000600910 USP17L12C9JPN9 530 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 USP17L21D6R901 530 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 TNFAIP1Q13829 316 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 SLC4A8Q2Y0W8 1093 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 CTR9Q6PD62 1173 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 APOBEC3FQ8IUX4 373 aaKnown RBP24.39■■□□□ 1.5
PNKP-215ENST00000600910 CTNNA3Q9UI47 895 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 PALD1Q9ULE6 856 aa24.39■■□□□ 1.5
PNKP-215ENST00000600910 MYH1P12882 1939 aa24.39■■□□□ 1.49
PNKP-215ENST00000600910 PITPNM2Q9BZ72 1349 aa24.39■■□□□ 1.49
PNKP-215ENST00000600910 TNNI2P48788 182 aa24.39■■□□□ 1.49
PNKP-215ENST00000600910 FAM83AQ86UY5 434 aa24.39■■□□□ 1.49
PNKP-215ENST00000600910 ZC3H15Q8WU90 426 aaKnown RBP24.39■■□□□ 1.49
PNKP-215ENST00000600910 FAM151AQ8WW52 585 aa24.39■■□□□ 1.49
PNKP-215ENST00000600910 ARPP21Q9UBL0 812 aaPredicted RBP24.39■■□□□ 1.49
PNKP-215ENST00000600910 NECTIN1Q15223 517 aa24.38■■□□□ 1.49
PNKP-215ENST00000600910 CYP2D7A0A087X1C5 515 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 MINDY4BA8MYZ0 360 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 POLR3DP05423 398 aaPredicted RBP24.37■■□□□ 1.49
PNKP-215ENST00000600910 POTEIP0CG38 1075 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 POTEJP0CG39 1038 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 RASA3Q14644 834 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 SBK1Q52WX2 424 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 ZSCAN29Q8IWY8 852 aaPredicted RBP24.37■■□□□ 1.49
PNKP-215ENST00000600910 DCPSQ96C86 337 aaKnown RBP24.37■■□□□ 1.49
PNKP-215ENST00000600910 UPF2Q9HAU5 1272 aaKnown RBP24.37■■□□□ 1.49
PNKP-215ENST00000600910 PGAP2Q9UHJ9 254 aa24.37■■□□□ 1.49
PNKP-215ENST00000600910 CYP2D6P10635 497 aa24.36■■□□□ 1.49
PNKP-215ENST00000600910 SH3BP5LQ7L8J4 393 aa24.36■■□□□ 1.49
PNKP-215ENST00000600910 AMOTL1Q8IY63 956 aa24.36■■□□□ 1.49
PNKP-215ENST00000600910 TMEM39BQ9GZU3 492 aa24.36■■□□□ 1.49
PNKP-215ENST00000600910 DEFB129Q9H1M3 183 aa24.36■■□□□ 1.49
PNKP-215ENST00000600910 COL2A1P02458 1487 aaPredicted RBP24.36■■□□□ 1.49
PNKP-215ENST00000600910 DDTLA6NHG4 134 aaPredicted RBP24.35■■□□□ 1.49
PNKP-215ENST00000600910 HSPA4P34932 840 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 HAND2P61296 217 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 EVX2Q03828 476 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 IMMTQ16891 758 aaKnown RBP24.35■■□□□ 1.49
PNKP-215ENST00000600910 GPBP1L1Q9HC44 474 aaPredicted RBP24.35■■□□□ 1.49
PNKP-215ENST00000600910 CLEC11AQ9Y240 323 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 ATRNL1Q5VV63 1379 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 LAMB1P07942 1786 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 ZNF213O14771 459 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 CYP21A2P08686 494 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 PLCD1P51178 756 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 PPARAQ07869 468 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 C12orf60Q5U649 245 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 CREB3L3Q68CJ9 461 aa24.35■■□□□ 1.49
PNKP-215ENST00000600910 DHX36Q9H2U1 1008 aaKnown RBP24.35■■□□□ 1.49
PNKP-215ENST00000600910 POLR2AP24928 1970 aaKnown RBP24.34■■□□□ 1.49
PNKP-215ENST00000600910 SMIM22K7EJ46 135 aa24.34■■□□□ 1.49
PNKP-215ENST00000600910 SLC27A2O14975 620 aa24.34■■□□□ 1.49
PNKP-215ENST00000600910 TTC6Q86TZ1 520 aa24.34■■□□□ 1.49
PNKP-215ENST00000600910 LAMA4Q16363 1823 aa24.34■■□□□ 1.49
PNKP-215ENST00000600910 MCCP23508 829 aa24.33■■□□□ 1.49
PNKP-215ENST00000600910 RNF20Q5VTR2 975 aa24.33■■□□□ 1.49
PNKP-215ENST00000600910 SULF1Q8IWU6 871 aa24.33■■□□□ 1.49
PNKP-215ENST00000600910 CDAN1Q8IWY9 1227 aa24.33■■□□□ 1.49
PNKP-215ENST00000600910 HLA-DOAP06340 250 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 YY1P25490 414 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 CTDSPL2Q05D32 466 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 KRT26Q7Z3Y9 468 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 CSRNP1Q96S65 589 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 C22orf23Q9BZE7 217 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 LDHDQ86WU2 507 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 STK11IPQ8N1F8 1099 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 TEPSINQ96N21 525 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 NBPF3Q9H094 633 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 PI4KBQ9UBF8 816 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 ANAPC4Q9UJX5 808 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 PPP2R3BQ9Y5P8 575 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 TAF6LQ9Y6J9 622 aa24.32■■□□□ 1.48
PNKP-215ENST00000600910 ADM5C9JUS6 153 aa24.31■■□□□ 1.48
PNKP-215ENST00000600910 ROBO3Q96MS0 1386 aa24.3■■□□□ 1.48
PNKP-215ENST00000600910 SIPA1L1O43166 1804 aa24.3■■□□□ 1.48
PNKP-215ENST00000600910 PRAMEF18Q5VWM3 479 aa24.3■■□□□ 1.48
PNKP-215ENST00000600910 TBC1D10CQ8IV04 446 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms