RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 MAST2Q6P0Q8 1798 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 GPR75-ASB3A0A0A6YYF3 556 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 ZBTB7BO15156 539 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 UQCRFS1P1P0C7P4 283 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 RHBDL3P58872 404 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 OS9Q13438 667 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 NSUN4Q96CB9 384 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 EFCC1Q9HA90 598 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 PTPN22Q9Y2R2 807 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
SHKBP1-226ENST00000600791 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-226ENST00000600791 SURF6O75683 361 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-226ENST00000600791 PICALMQ13492 652 aa18.5■□□□□ 0.55
SHKBP1-226ENST00000600791 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-226ENST00000600791 DBNDD2Q9BQY9 259 aa18.5■□□□□ 0.55
SHKBP1-226ENST00000600791 KCNH4Q9UQ05 1017 aa18.5■□□□□ 0.55
SHKBP1-226ENST00000600791 PHF20L1A8MW92 1017 aa18.49■□□□□ 0.55
SHKBP1-226ENST00000600791 TLR2O60603 784 aa18.49■□□□□ 0.55
SHKBP1-226ENST00000600791 GSTO1P78417 241 aa18.49■□□□□ 0.55
SHKBP1-226ENST00000600791 RAI14Q9P0K7 980 aa18.49■□□□□ 0.55
SHKBP1-226ENST00000600791 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
SHKBP1-226ENST00000600791 DOCK1Q14185 1865 aa18.48■□□□□ 0.55
SHKBP1-226ENST00000600791 SLURP2P0DP57 97 aa18.48■□□□□ 0.55
SHKBP1-226ENST00000600791 MAP3K10Q02779 954 aa18.48■□□□□ 0.55
SHKBP1-226ENST00000600791 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
SHKBP1-226ENST00000600791 SCYL3Q8IZE3 742 aa18.48■□□□□ 0.55
SHKBP1-226ENST00000600791 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-226ENST00000600791 LDHCP07864 332 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 MOGSQ13724 837 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 ANKRD23Q86SG2 305 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 PANK1Q8TE04 598 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 SNRKQ9NRH2 765 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
SHKBP1-226ENST00000600791 COL2A1P02458 1487 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-226ENST00000600791 MKI67P46013 3256 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-226ENST00000600791 PDHXO00330 501 aa18.46■□□□□ 0.55
SHKBP1-226ENST00000600791 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-226ENST00000600791 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
SHKBP1-226ENST00000600791 DBNLQ9UJU6 430 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-226ENST00000600791 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 PHIPQ8WWQ0 1821 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 PTPRAP18433 802 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 LACTBP83111 547 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 ARHGEF6Q15052 776 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 ARHGAP39Q9C0H5 1083 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 TLR7Q9NYK1 1049 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 MYO5AQ9Y4I1 1855 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 ADGRA2Q96PE1 1338 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 PTPRFP10586 1907 aa18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-226ENST00000600791 CXCL11O14625 94 aa18.44■□□□□ 0.54
SHKBP1-226ENST00000600791 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-226ENST00000600791 ARMC5Q96C12 935 aa18.44■□□□□ 0.54
SHKBP1-226ENST00000600791 ZNF512BQ96KM6 892 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-226ENST00000600791 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-226ENST00000600791 ZHX2Q9Y6X8 837 aa18.44■□□□□ 0.54
SHKBP1-226ENST00000600791 FAM196BA6NMK8 535 aa18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 CTNND1O60716 968 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 NAA16Q6N069 864 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 C17orf99Q6UX52 265 aa18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 SH3RF3Q8TEJ3 882 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 EAF2Q96CJ1 260 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 CPA4Q9UI42 421 aa18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 CDK5RAP2Q96SN8 1893 aa18.43■□□□□ 0.54
SHKBP1-226ENST00000600791 A0A0G2JLL6 359 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 TBC1D12O60347 775 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 ZAP70P43403 619 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 KIF22Q14807 665 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 PRRT2Q7Z6L0 340 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 ADGRA1Q86SQ6 560 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 CCDC8Q9H0W5 538 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 AATFQ9NY61 560 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 AFG3L2Q9Y4W6 797 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 FOCADQ5VW36 1801 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 ATAD5Q96QE3 1844 aa18.42■□□□□ 0.54
SHKBP1-226ENST00000600791 POTEFA5A3E0 1075 aa18.41■□□□□ 0.54
SHKBP1-226ENST00000600791 PARK7Q99497 189 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-226ENST00000600791 NOL10Q9BSC4 688 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-226ENST00000600791 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHKBP1-226ENST00000600791 PIH1D3Q9NQM4 214 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-226ENST00000600791 BAG3O95817 575 aa18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 CYP2C8P10632 490 aa18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 CTGFP29279 349 aa18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 SLC9C1Q4G0N8 1177 aa18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 FASTKD5Q7L8L6 764 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 ZNF333Q96JL9 665 aa18.4■□□□□ 0.54
SHKBP1-226ENST00000600791 TRIM75PA6NK02 468 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms