RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 HMG20BQ9P0W2 317 aa14.07□□□□□ -0.16
HIF3A-217ENST00000600236 GPR75-ASB3A0A0A6YYF3 556 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 PDHXO00330 501 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 CXCL11O14625 94 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
HIF3A-217ENST00000600236 LACTBP83111 547 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-217ENST00000600236 SLC9C1Q4G0N8 1177 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 TTC39AQ5SRH9 613 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 PRPF38BQ5VTL8 546 aaKnown RBP14.06□□□□□ -0.16
HIF3A-217ENST00000600236 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
HIF3A-217ENST00000600236 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 ZFPM1Q8IX07 1006 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 GPR108Q9NPR9 543 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 LRP2BPQ9P2M1 347 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 RFX7Q2KHR2 1363 aa14.06□□□□□ -0.16
HIF3A-217ENST00000600236 HOXD10P28358 340 aa14.05□□□□□ -0.16
HIF3A-217ENST00000600236 ATP8B2P98198 1209 aa14.05□□□□□ -0.16
HIF3A-217ENST00000600236 POLA2Q14181 598 aa14.05□□□□□ -0.16
HIF3A-217ENST00000600236 NSUN4Q96CB9 384 aaKnown RBP14.05□□□□□ -0.16
HIF3A-217ENST00000600236 PTCH2Q9Y6C5 1203 aa14.05□□□□□ -0.16
HIF3A-217ENST00000600236 ZHX2Q9Y6X8 837 aa14.05□□□□□ -0.16
HIF3A-217ENST00000600236 ATRNL1Q5VV63 1379 aa14.05□□□□□ -0.16
HIF3A-217ENST00000600236 DDTLA6NHG4 134 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-217ENST00000600236 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
HIF3A-217ENST00000600236 IGSF3O75054 1194 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 SURF6O75683 361 aaKnown RBP14.04□□□□□ -0.16
HIF3A-217ENST00000600236 BAG3O95817 575 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 MAP3K10Q02779 954 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 TNNI3KQ59H18 835 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 C17orf99Q6UX52 265 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 SSH3Q8TE77 659 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 CPA4Q9UI42 421 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 FPGT-TNNI3KV9GXZ4 949 aa14.04□□□□□ -0.16
HIF3A-217ENST00000600236 TBC1D12O60347 775 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 PTPRAP18433 802 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 MCAMP43121 646 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 RHBDL3P58872 404 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 PI16Q6UXB8 463 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 TBC1D9Q6ZT07 1266 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 SH3BP5LQ7L8J4 393 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 ZNF333Q96JL9 665 aa14.03□□□□□ -0.16
HIF3A-217ENST00000600236 DDX4Q9NQI0 724 aaKnown RBP14.03□□□□□ -0.16
HIF3A-217ENST00000600236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-217ENST00000600236 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 A0A0G2JLL6 359 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-217ENST00000600236 POTEFA5A3E0 1075 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 PLCG2P16885 1265 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 CAP1Q01518 475 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 NAA16Q6N069 864 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-217ENST00000600236 GADL1Q6ZQY3 521 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 PRRT2Q7Z6L0 340 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-217ENST00000600236 TEX11Q8IYF3 940 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 ARHGAP39Q9C0H5 1083 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 OSBPL5Q9H0X9 879 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-217ENST00000600236 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.02□□□□□ -0.17
HIF3A-217ENST00000600236 SLC45A1Q9Y2W3 748 aa14.02□□□□□ -0.17
HIF3A-217ENST00000600236 COL2A1P02458 1487 aaPredicted RBP14.01□□□□□ -0.17
HIF3A-217ENST00000600236 SLC34A2O95436 690 aa14.01□□□□□ -0.17
HIF3A-217ENST00000600236 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
HIF3A-217ENST00000600236 MS4A1P11836 297 aa14.01□□□□□ -0.17
HIF3A-217ENST00000600236 PSMC4P43686 418 aa14.01□□□□□ -0.17
HIF3A-217ENST00000600236 FCGRTP55899 365 aa14.01□□□□□ -0.17
HIF3A-217ENST00000600236 ZNF512BQ96KM6 892 aaPredicted RBP14.01□□□□□ -0.17
HIF3A-217ENST00000600236 DBNDD2Q9BQY9 259 aa14.01□□□□□ -0.17
HIF3A-217ENST00000600236 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
HIF3A-217ENST00000600236 AFG3L2Q9Y4W6 797 aa14.01□□□□□ -0.17
HIF3A-217ENST00000600236 ADGRA2Q96PE1 1338 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 TRIM75PA6NK02 468 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 ZBTB7BO15156 539 aaPredicted RBP14□□□□□ -0.17
HIF3A-217ENST00000600236 MOGSQ13724 837 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 GPAT2Q6NUI2 795 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 RAET1EQ8TD07 263 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 SMCR8Q8TEV9 937 aaPredicted RBP14□□□□□ -0.17
HIF3A-217ENST00000600236 ZNF384Q8TF68 577 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 DHX36Q9H2U1 1008 aaKnown RBP14□□□□□ -0.17
HIF3A-217ENST00000600236 SNRKQ9NRH2 765 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 SRRDQ9UH36 339 aa14□□□□□ -0.17
HIF3A-217ENST00000600236 HERC5Q9UII4 1024 aaKnown RBP14□□□□□ -0.17
HIF3A-217ENST00000600236 DOCK2Q92608 1830 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 MYPNQ86TC9 1320 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-217ENST00000600236 CYP2C8P10632 490 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 GCC1Q96CN9 775 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 YTHDC1Q96MU7 727 aaKnown RBP13.99□□□□□ -0.17
HIF3A-217ENST00000600236 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 AS3MTQ9HBK9 375 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 AATFQ9NY61 560 aaKnown RBP eCLIP13.99□□□□□ -0.17
HIF3A-217ENST00000600236 PNMA3Q9UL41 463 aa13.99□□□□□ -0.17
HIF3A-217ENST00000600236 MYH2Q9UKX2 1941 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 BCRP11274 1271 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 RLBP1P12271 317 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 EN2P19622 333 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-217ENST00000600236 OSBPP22059 807 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 PABPC4Q13310 644 aaKnown RBP eCLIP13.98□□□□□ -0.17
HIF3A-217ENST00000600236 HSP90AB4PQ58FF6 505 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms