RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 ESYT1Q9BSJ8 1104 aa10.34□□□□□ -0.75
LINC00343-206ENST00000598478 RNF186Q9NXI6 227 aa10.34□□□□□ -0.75
LINC00343-206ENST00000598478 DLL1O00548 723 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 IL2RAP01589 272 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 CENPCQ03188 943 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 NEDD1Q8NHV4 660 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
LINC00343-206ENST00000598478 CEP126Q9P2H0 1117 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 AKAP11Q9UKA4 1901 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
LINC00343-206ENST00000598478 UBR2Q8IWV8 1755 aa10.32□□□□□ -0.76
LINC00343-206ENST00000598478 PHF20L1A8MW92 1017 aa10.32□□□□□ -0.76
LINC00343-206ENST00000598478 FAM155AB1AL88 458 aaPredicted RBP10.32□□□□□ -0.76
LINC00343-206ENST00000598478 CAMTA2O94983 1202 aa10.32□□□□□ -0.76
LINC00343-206ENST00000598478 MYCP01106 439 aaPredicted RBP10.32□□□□□ -0.76
LINC00343-206ENST00000598478 HUNKP57058 714 aa10.32□□□□□ -0.76
LINC00343-206ENST00000598478 KIF23Q02241 960 aaPredicted RBP10.32□□□□□ -0.76
LINC00343-206ENST00000598478 SAGE1Q9NXZ1 904 aa10.32□□□□□ -0.76
LINC00343-206ENST00000598478 NSFL1CQ9UNZ2 370 aaKnown RBP10.32□□□□□ -0.76
LINC00343-206ENST00000598478 STARD3NLO95772 234 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 SULT6B1Q6IMI4 303 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 PODNQ7Z5L7 613 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
LINC00343-206ENST00000598478 PSMD1Q99460 953 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 GPAMQ9HCL2 828 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 ADARB2Q9NS39 739 aaKnown RBP10.31□□□□□ -0.76
LINC00343-206ENST00000598478 GPRC5DQ9NZD1 345 aa10.31□□□□□ -0.76
LINC00343-206ENST00000598478 MRC1P22897 1456 aa10.3□□□□□ -0.76
LINC00343-206ENST00000598478 KLRG2A4D1S0 409 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-206ENST00000598478 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
LINC00343-206ENST00000598478 PHKA2P46019 1235 aa10.3□□□□□ -0.76
LINC00343-206ENST00000598478 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
LINC00343-206ENST00000598478 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-206ENST00000598478 ZSCAN10Q96SZ4 725 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-206ENST00000598478 HRH3Q9Y5N1 445 aa10.3□□□□□ -0.76
LINC00343-206ENST00000598478 CEP290O15078 2479 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 FAM177BA6PVY3 158 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 A1BGP04217 495 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 THBS1P07996 1170 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-206ENST00000598478 RGMBQ6NW40 437 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 XAGE2Q96GT9 111 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 PGAP2Q9UHJ9 254 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 TRIOBPQ9H2D6 2365 aa10.29□□□□□ -0.76
LINC00343-206ENST00000598478 A0A1B0GTH6 734 aa10.28□□□□□ -0.76
LINC00343-206ENST00000598478 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
LINC00343-206ENST00000598478 IL6STP40189 918 aaPredicted RBP10.28□□□□□ -0.76
LINC00343-206ENST00000598478 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
LINC00343-206ENST00000598478 GMPSP49915 693 aaPredicted RBP10.28□□□□□ -0.76
LINC00343-206ENST00000598478 USP48Q86UV5 1035 aa10.28□□□□□ -0.76
LINC00343-206ENST00000598478 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
LINC00343-206ENST00000598478 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
LINC00343-206ENST00000598478 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
LINC00343-206ENST00000598478 UNC80Q8N2C7 3258 aa10.27□□□□□ -0.76
LINC00343-206ENST00000598478 SHTN1A0MZ66 631 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 TCERG1O14776 1098 aaKnown RBP10.27□□□□□ -0.77
LINC00343-206ENST00000598478 OIP5O43482 229 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 ALDH1B1P30837 517 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 MAP2K3P46734 347 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 ZNF157P51786 506 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-206ENST00000598478 GNASQ5JWF2 1037 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 CDC37L1Q7L3B6 337 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 TRPM4Q8TD43 1214 aa10.27□□□□□ -0.77
LINC00343-206ENST00000598478 OXCT2Q9BYC2 517 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-206ENST00000598478 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
LINC00343-206ENST00000598478 CXCL9Q07325 125 aa10.26□□□□□ -0.77
LINC00343-206ENST00000598478 TMEM214Q6NUQ4 689 aaKnown RBP10.26□□□□□ -0.77
LINC00343-206ENST00000598478 NIM1KQ8IY84 436 aa10.26□□□□□ -0.77
LINC00343-206ENST00000598478 TTC5Q8N0Z6 440 aa10.26□□□□□ -0.77
LINC00343-206ENST00000598478 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
LINC00343-206ENST00000598478 NPC1L1Q9UHC9 1359 aa10.26□□□□□ -0.77
LINC00343-206ENST00000598478 PKN2Q16513 984 aaKnown RBP10.25□□□□□ -0.77
LINC00343-206ENST00000598478 AOC3Q16853 763 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 PLA2G4EQ3MJ16 856 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 C4orf17Q53FE4 359 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
LINC00343-206ENST00000598478 SLC17A8Q8NDX2 589 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 ZNF296Q8WUU4 475 aaPredicted RBP10.25□□□□□ -0.77
LINC00343-206ENST00000598478 HDAC9Q9UKV0 1011 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 HEG1Q9ULI3 1381 aa10.25□□□□□ -0.77
LINC00343-206ENST00000598478 PPIP5K2O43314 1243 aa10.24□□□□□ -0.77
LINC00343-206ENST00000598478 TBC1D8O95759 1140 aa10.24□□□□□ -0.77
LINC00343-206ENST00000598478 EIF4G2P78344 907 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC00343-206ENST00000598478 TSGA10IPQ3SY00 556 aa10.24□□□□□ -0.77
LINC00343-206ENST00000598478 GBA2Q9HCG7 927 aaPredicted RBP10.24□□□□□ -0.77
LINC00343-206ENST00000598478 DOLKQ9UPQ8 538 aa10.24□□□□□ -0.77
LINC00343-206ENST00000598478 NIP7Q9Y221 180 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC00343-206ENST00000598478 MSTNO14793 375 aa10.23□□□□□ -0.77
LINC00343-206ENST00000598478 MSX1P28360 303 aa10.23□□□□□ -0.77
LINC00343-206ENST00000598478 UBAP2LQ14157 1087 aaKnown RBP10.23□□□□□ -0.77
LINC00343-206ENST00000598478 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
LINC00343-206ENST00000598478 PGBD3Q8N328 593 aa10.23□□□□□ -0.77
LINC00343-206ENST00000598478 PHTF2Q8N3S3 785 aa10.23□□□□□ -0.77
LINC00343-206ENST00000598478 C2orf69Q8N8R5 385 aa10.23□□□□□ -0.77
LINC00343-206ENST00000598478 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms