RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 RLBP1P12271 317 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 BTDP43251 543 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 GSTO1P78417 241 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 PI16Q6UXB8 463 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 SSH3Q8TE77 659 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 RAI14Q9P0K7 980 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 PTPN22Q9Y2R2 807 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 GPR75-ASB3A0A0A6YYF3 556 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 MCAMP43121 646 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 PICALMQ13492 652 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 ARHGEF6Q15052 776 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 TTC39AQ5SRH9 613 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZNF384Q8TF68 577 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 NSUN4Q96CB9 384 aaKnown RBP10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 GPR108Q9NPR9 543 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 DDX4Q9NQI0 724 aaKnown RBP10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 SNRKQ9NRH2 765 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 LRP2BPQ9P2M1 347 aa10.9□□□□□ -0.66
ARHGEF1-215ENST00000598444 MYH1P12882 1939 aa10.9□□□□□ -0.67
ARHGEF1-215ENST00000598444 FOCADQ5VW36 1801 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 TLR2O60603 784 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 CAP1Q01518 475 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 MAP3K10Q02779 954 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 TNNI3KQ59H18 835 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 CCDC158Q5M9N0 1113 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 NOL9Q5SY16 702 aaKnown RBP10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 PICK1Q9NRD5 415 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 FPGT-TNNI3KV9GXZ4 949 aa10.89□□□□□ -0.67
ARHGEF1-215ENST00000598444 RBBP6Q7Z6E9 1792 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 PDHXO00330 501 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 MAP4K4O95819 1239 aaPredicted RBP10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 SLURP2P0DP57 97 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 RHBDL3P58872 404 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 KIF22Q14807 665 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 PANK1Q8TE04 598 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 DBNDD2Q9BQY9 259 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 NOP58Q9Y2X3 529 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 ZHX2Q9Y6X8 837 aa10.88□□□□□ -0.67
ARHGEF1-215ENST00000598444 CEP290O15078 2479 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 CXCL11O14625 94 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 CTNND1O60716 968 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 PTPRAP18433 802 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 NAA16Q6N069 864 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 TEX11Q8IYF3 940 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 SCYL3Q8IZE3 742 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 NOL10Q9BSC4 688 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 CCDC8Q9H0W5 538 aaPredicted RBP10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 MAST2Q6P0Q8 1798 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 RFX7Q2KHR2 1363 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 ATRNL1Q5VV63 1379 aa10.87□□□□□ -0.67
ARHGEF1-215ENST00000598444 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 CYP2E1P05181 493 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 MS4A1P11836 297 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 LACTBP83111 547 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 MOGSQ13724 837 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 C17orf99Q6UX52 265 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 SH3RF3Q8TEJ3 882 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 ARHGAP39Q9C0H5 1083 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 CPA4Q9UI42 421 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 AFG3L2Q9Y4W6 797 aa10.86□□□□□ -0.67
ARHGEF1-215ENST00000598444 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 TBC1D12O60347 775 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 BAG3O95817 575 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 ZAP70P43403 619 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 GPAT2Q6NUI2 795 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 GADL1Q6ZQY3 521 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 FASTKD5Q7L8L6 764 aaKnown RBP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 ARMC5Q96C12 935 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 EAF2Q96CJ1 260 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 ZNF512BQ96KM6 892 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 OSBPL5Q9H0X9 879 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 AATFQ9NY61 560 aaKnown RBP eCLIP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 DBNLQ9UJU6 430 aaKnown RBP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 PTCH2Q9Y6C5 1203 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 SIPA1L1O43166 1804 aa10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
ARHGEF1-215ENST00000598444 A0A0G2JLL6 359 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 TRIM75PA6NK02 468 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 FAM196BA6NMK8 535 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 GNRH1P01148 92 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 PLCG2P16885 1265 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 PSMC4P43686 418 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 PPP4CP60510 307 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 PRRT2Q7Z6L0 340 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 ERC1Q8IUD2 1116 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms