RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 VGLL4Q14135 290 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 C17orf99Q6UX52 265 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00343-205ENST00000598229 TATDN2Q93075 761 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
LINC00343-205ENST00000598229 ZNF70Q9UC06 446 aaPredicted RBP11.91□□□□□ -0.5
LINC00343-205ENST00000598229 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 SOX1O00570 391 aaPredicted RBP11.9□□□□□ -0.5
LINC00343-205ENST00000598229 CSF1RP07333 972 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 ZNF853P0CG23 659 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 CCL5P13501 91 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 ITGA6P23229 1130 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 ERO1BQ86YB8 467 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 MAP3K2Q9Y2U5 619 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 RIPOR2Q9Y4F9 1068 aa11.9□□□□□ -0.5
LINC00343-205ENST00000598229 AOX1Q06278 1338 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
LINC00343-205ENST00000598229 SMAPO00193 183 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 BMP8BP34820 402 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 PSMC4P43686 418 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00343-205ENST00000598229 CHRNDQ07001 517 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 NEXNQ0ZGT2 675 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 RAET1EQ8TD07 263 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 RNF208Q9H0X6 261 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 STXBP5LQ9Y2K9 1186 aa11.89□□□□□ -0.51
LINC00343-205ENST00000598229 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 PI4KAP2A4QPH2 592 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
LINC00343-205ENST00000598229 SGPL1O95470 568 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 TNNI2P48788 182 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 UBXN2AP68543 259 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 PI4KAP1Q8N8J0 262 aa11.88□□□□□ -0.51
LINC00343-205ENST00000598229 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
LINC00343-205ENST00000598229 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 CTGFP29279 349 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 PPIL2Q13356 520 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 UBE3BQ7Z3V4 1068 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
LINC00343-205ENST00000598229 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 TMEM39BQ9GZU3 492 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
LINC00343-205ENST00000598229 CDHR5Q9HBB8 845 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 STAP2Q9UGK3 403 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 SNCAIPQ9Y6H5 919 aa11.87□□□□□ -0.51
LINC00343-205ENST00000598229 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
LINC00343-205ENST00000598229 IRF6O14896 467 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
LINC00343-205ENST00000598229 GNAI1P63096 354 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 ANKRD23Q86SG2 305 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 DEFB123Q8N688 67 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 GDF15Q99988 308 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
LINC00343-205ENST00000598229 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
LINC00343-205ENST00000598229 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 SNAP23O00161 211 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 TAF5LO75529 589 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 CASP7P55210 303 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 HDLBPQ00341 1268 aaKnown RBP11.85□□□□□ -0.51
LINC00343-205ENST00000598229 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
LINC00343-205ENST00000598229 PPATQ06203 517 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 GCKRQ14397 625 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 RALBP1Q15311 655 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
LINC00343-205ENST00000598229 LRIT3Q3SXY7 679 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 TTF2Q9UNY4 1162 aaKnown RBP11.85□□□□□ -0.51
LINC00343-205ENST00000598229 ECM29Q5VYK3 1845 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 MYPNQ86TC9 1320 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 ADGRA2Q96PE1 1338 aa11.85□□□□□ -0.51
LINC00343-205ENST00000598229 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 FKBP1CQ5VVH2 108 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
LINC00343-205ENST00000598229 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 MTMR10Q9NXD2 777 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 LAMA3Q16787 3333 aa11.84□□□□□ -0.51
LINC00343-205ENST00000598229 PDHXO00330 501 aa11.83□□□□□ -0.52
LINC00343-205ENST00000598229 TFRCP02786 760 aaKnown RBP11.83□□□□□ -0.52
LINC00343-205ENST00000598229 CRKP46108 304 aa11.83□□□□□ -0.52
LINC00343-205ENST00000598229 FCGRTP55899 365 aa11.83□□□□□ -0.52
LINC00343-205ENST00000598229 FAM83AQ86UY5 434 aa11.83□□□□□ -0.52
LINC00343-205ENST00000598229 PXYLP1Q8TE99 480 aa11.83□□□□□ -0.52
LINC00343-205ENST00000598229 ZKSCAN4Q969J2 545 aaPredicted RBP11.83□□□□□ -0.52
LINC00343-205ENST00000598229 WRNIP1Q96S55 665 aa11.83□□□□□ -0.52
LINC00343-205ENST00000598229 COL25A1Q9BXS0 654 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms