RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 NPM3O75607 178 aaKnown RBP27.74■■■□□ 2.03
IRF3-220ENST00000598108 BAG3O95817 575 aa27.74■■■□□ 2.03
IRF3-220ENST00000598108 SLURP2P0DP57 97 aa27.74■■■□□ 2.03
IRF3-220ENST00000598108 DYNLL1P63167 89 aaKnown RBP27.74■■■□□ 2.03
IRF3-220ENST00000598108 AAMPQ13685 434 aa27.74■■■□□ 2.03
IRF3-220ENST00000598108 TTF1Q15361 905 aaPredicted RBP27.74■■■□□ 2.03
IRF3-220ENST00000598108 COL13A1Q5TAT6 717 aaPredicted RBP27.74■■■□□ 2.03
IRF3-220ENST00000598108 DCAF15Q66K64 600 aa27.74■■■□□ 2.03
IRF3-220ENST00000598108 ZSCAN29Q8IWY8 852 aaPredicted RBP27.74■■■□□ 2.03
IRF3-220ENST00000598108 CNKSR2Q8WXI2 1034 aa27.74■■■□□ 2.03
IRF3-220ENST00000598108 WRNIP1Q96S55 665 aa27.74■■■□□ 2.03
IRF3-220ENST00000598108 NOL10Q9BSC4 688 aaKnown RBP27.74■■■□□ 2.03
IRF3-220ENST00000598108 ZKSCAN4Q969J2 545 aaPredicted RBP27.73■■■□□ 2.03
IRF3-220ENST00000598108 ZNF341Q9BYN7 854 aa27.73■■■□□ 2.03
IRF3-220ENST00000598108 ECHDC1Q9NTX5 307 aa27.73■■■□□ 2.03
IRF3-220ENST00000598108 RNF186Q9NXI6 227 aa27.73■■■□□ 2.03
IRF3-220ENST00000598108 ATRNL1Q5VV63 1379 aa27.73■■■□□ 2.03
IRF3-220ENST00000598108 TSHZ3Q63HK5 1081 aa27.72■■■□□ 2.03
IRF3-220ENST00000598108 REM2Q8IYK8 340 aaPredicted RBP27.72■■■□□ 2.03
IRF3-220ENST00000598108 MIGA1Q8NAN2 632 aa27.72■■■□□ 2.03
IRF3-220ENST00000598108 PAG1Q9NWQ8 432 aa27.72■■■□□ 2.03
IRF3-220ENST00000598108 ZNF112Q9UJU3 913 aa27.72■■■□□ 2.03
IRF3-220ENST00000598108 CA12O43570 354 aa27.71■■■□□ 2.03
IRF3-220ENST00000598108 INPP5BP32019 993 aa27.71■■■□□ 2.03
IRF3-220ENST00000598108 TM4SF4P48230 202 aa27.71■■■□□ 2.03
IRF3-220ENST00000598108 OTUD7AQ8TE49 926 aaPredicted RBP27.71■■■□□ 2.03
IRF3-220ENST00000598108 CSADQ9Y600 493 aa27.71■■■□□ 2.03
IRF3-220ENST00000598108 SNCAIPQ9Y6H5 919 aa27.71■■■□□ 2.03
IRF3-220ENST00000598108 ZBTB48P10074 688 aaPredicted RBP27.7■■■□□ 2.02
IRF3-220ENST00000598108 PDE6AP16499 860 aa27.7■■■□□ 2.02
IRF3-220ENST00000598108 PLCG2P16885 1265 aa27.7■■■□□ 2.02
IRF3-220ENST00000598108 MAP3K10Q02779 954 aa27.7■■■□□ 2.02
IRF3-220ENST00000598108 SLC9C2Q5TAH2 1124 aa27.7■■■□□ 2.02
IRF3-220ENST00000598108 TGFBRAP1Q8WUH2 860 aa27.7■■■□□ 2.02
IRF3-220ENST00000598108 OPTNQ96CV9 577 aa27.7■■■□□ 2.02
IRF3-220ENST00000598108 OSBPL5Q9H0X9 879 aaPredicted RBP27.7■■■□□ 2.02
IRF3-220ENST00000598108 TRPA1O75762 1119 aa27.69■■■□□ 2.02
IRF3-220ENST00000598108 IRX6P78412 446 aaPredicted RBP27.69■■■□□ 2.02
IRF3-220ENST00000598108 SLFNL1Q499Z3 407 aa27.69■■■□□ 2.02
IRF3-220ENST00000598108 PRDM10Q9NQV6 1147 aa27.69■■■□□ 2.02
IRF3-220ENST00000598108 TCRBV5S4A2TA0A5A2 114 aa27.68■■■□□ 2.02
IRF3-220ENST00000598108 PHF20L1A8MW92 1017 aa27.68■■■□□ 2.02
IRF3-220ENST00000598108 ANKRD45Q5TZF3 282 aa27.68■■■□□ 2.02
IRF3-220ENST00000598108 MAPKAPK5Q8IW41 473 aa27.68■■■□□ 2.02
IRF3-220ENST00000598108 MYO5AQ9Y4I1 1855 aaKnown RBP27.68■■■□□ 2.02
IRF3-220ENST00000598108 IGHDP01880 384 aa27.67■■■□□ 2.02
IRF3-220ENST00000598108 TMED8Q6PL24 325 aaPredicted RBP27.67■■■□□ 2.02
IRF3-220ENST00000598108 GCC1Q96CN9 775 aa27.67■■■□□ 2.02
IRF3-220ENST00000598108 ZNF532Q9HCE3 1301 aa27.67■■■□□ 2.02
IRF3-220ENST00000598108 MANSC4A6NHS7 340 aaPredicted RBP27.66■■■□□ 2.02
IRF3-220ENST00000598108 CHGBP05060 677 aa27.66■■■□□ 2.02
IRF3-220ENST00000598108 RIOK1Q9BRS2 568 aaKnown RBP27.66■■■□□ 2.02
IRF3-220ENST00000598108 SAGE1Q9NXZ1 904 aa27.66■■■□□ 2.02
IRF3-220ENST00000598108 SPDYE5A6NIY4 337 aa27.65■■■□□ 2.02
IRF3-220ENST00000598108 SREBF2Q12772 1141 aa27.65■■■□□ 2.02
IRF3-220ENST00000598108 OTUD5Q96G74 571 aa27.65■■■□□ 2.02
IRF3-220ENST00000598108 GPATCH3Q96I76 525 aa27.65■■■□□ 2.02
IRF3-220ENST00000598108 MS4A4AQ96JQ5 239 aa27.65■■■□□ 2.02
IRF3-220ENST00000598108 RWDD1Q9H446 243 aaPredicted RBP27.65■■■□□ 2.02
IRF3-220ENST00000598108 FLT1P17948 1338 aa27.65■■■□□ 2.02
IRF3-220ENST00000598108 FAM196BA6NMK8 535 aa27.64■■■□□ 2.02
IRF3-220ENST00000598108 ERO1BQ86YB8 467 aa27.64■■■□□ 2.02
IRF3-220ENST00000598108 MAST2Q6P0Q8 1798 aa27.63■■■□□ 2.01
IRF3-220ENST00000598108 MAGEB6P1A0A0J9YX57 407 aa27.63■■■□□ 2.01
IRF3-220ENST00000598108 TBC1D12O60347 775 aa27.63■■■□□ 2.01
IRF3-220ENST00000598108 ADD2P35612 726 aa27.63■■■□□ 2.01
IRF3-220ENST00000598108 PTPN18Q99952 460 aa27.63■■■□□ 2.01
IRF3-220ENST00000598108 SAP30BPQ9UHR5 308 aaKnown RBP27.63■■■□□ 2.01
IRF3-220ENST00000598108 IGF2BP3O00425 579 aaKnown RBP eCLIP27.62■■■□□ 2.01
IRF3-220ENST00000598108 INHBEP58166 350 aa27.62■■■□□ 2.01
IRF3-220ENST00000598108 NOL9Q5SY16 702 aaKnown RBP27.62■■■□□ 2.01
IRF3-220ENST00000598108 IFNL1Q8IU54 200 aa27.62■■■□□ 2.01
IRF3-220ENST00000598108 PALD1Q9ULE6 856 aa27.62■■■□□ 2.01
IRF3-220ENST00000598108 SALL3Q9BXA9 1300 aa27.62■■■□□ 2.01
IRF3-220ENST00000598108 OTOFQ9HC10 1997 aa27.61■■■□□ 2.01
IRF3-220ENST00000598108 TESPA1A2RU30 521 aaPredicted RBP27.61■■■□□ 2.01
IRF3-220ENST00000598108 IRF6O14896 467 aa27.61■■■□□ 2.01
IRF3-220ENST00000598108 CERS3Q8IU89 383 aa27.61■■■□□ 2.01
IRF3-220ENST00000598108 SMC5Q8IY18 1101 aa27.61■■■□□ 2.01
IRF3-220ENST00000598108 PI4K2BQ8TCG2 481 aa27.61■■■□□ 2.01
IRF3-220ENST00000598108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.61■■■□□ 2.01
IRF3-220ENST00000598108 COL2A1P02458 1487 aaPredicted RBP27.61■■■□□ 2.01
IRF3-220ENST00000598108 TBC1D8O95759 1140 aa27.6■■■□□ 2.01
IRF3-220ENST00000598108 USP5P45974 858 aa27.6■■■□□ 2.01
IRF3-220ENST00000598108 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.6■■■□□ 2.012e-6■■■■□ 22
IRF3-220ENST00000598108 DHX36Q9H2U1 1008 aaKnown RBP27.6■■■□□ 2.01
IRF3-220ENST00000598108 R3HDMLQ9H3Y0 253 aa27.6■■■□□ 2.01
IRF3-220ENST00000598108 PI4KBQ9UBF8 816 aa27.6■■■□□ 2.01
IRF3-220ENST00000598108 TTC41PQ6P2S7 1318 aa27.6■■■□□ 2.01
IRF3-220ENST00000598108 MX1P20591 662 aa27.59■■■□□ 2.01
IRF3-220ENST00000598108 PPATQ06203 517 aa27.59■■■□□ 2.01
IRF3-220ENST00000598108 PPIL2Q13356 520 aa27.59■■■□□ 2.01
IRF3-220ENST00000598108 RRP1BQ14684 758 aaKnown RBP27.59■■■□□ 2.01
IRF3-220ENST00000598108 BRI3BPQ8WY22 251 aa27.59■■■□□ 2.01
IRF3-220ENST00000598108 ZBTB47Q9UFB7 747 aaPredicted RBP27.59■■■□□ 2.01
IRF3-220ENST00000598108 DOCK2Q92608 1830 aa27.59■■■□□ 2.01
IRF3-220ENST00000598108 GTF2A2P52657 109 aa27.58■■■□□ 2.01
IRF3-220ENST00000598108 UBE3CQ15386 1083 aa27.58■■■□□ 2.01
IRF3-220ENST00000598108 SLC4A8Q2Y0W8 1093 aa27.58■■■□□ 2.01
IRF3-220ENST00000598108 B4GALNT3Q6L9W6 998 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms