RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 PHF20L1A8MW92 1017 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 ZBTB22O15209 634 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 ENTPD3O75355 529 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 BTDP43251 543 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 MECOMQ03112 1051 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 PICALMQ13492 652 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 ATF7IPQ6VMQ6 1270 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 NBPF11Q86T75 865 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 NEUROD6Q96NK8 337 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
LSM4-205ENST00000597776 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
LSM4-205ENST00000597776 GNAI2P04899 355 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 SLC4A8Q2Y0W8 1093 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.33
LSM4-205ENST00000597776 GPAT2Q6NUI2 795 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 SCYL3Q8IZE3 742 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
LSM4-205ENST00000597776 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 PICK1Q9NRD5 415 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.02□□□□□ -0.33
LSM4-205ENST00000597776 ZHX2Q9Y6X8 837 aa13.02□□□□□ -0.33
LSM4-205ENST00000597776 CYP2C8P10632 490 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 PTPRAP18433 802 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 PSMC4P43686 418 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 RHBDL3P58872 404 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 CCDC84Q86UT8 332 aaPredicted RBP13.01□□□□□ -0.33
LSM4-205ENST00000597776 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
LSM4-205ENST00000597776 GPR75-ASB3A0A0A6YYF3 556 aa13□□□□□ -0.33
LSM4-205ENST00000597776 A0A0G2JLL6 359 aaPredicted RBP13□□□□□ -0.33
LSM4-205ENST00000597776 FAM196BA6NMK8 535 aa13□□□□□ -0.33
LSM4-205ENST00000597776 CXCL11O14625 94 aa13□□□□□ -0.33
LSM4-205ENST00000597776 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
LSM4-205ENST00000597776 OSBPP22059 807 aa13□□□□□ -0.33
LSM4-205ENST00000597776 MAP3K10Q02779 954 aa13□□□□□ -0.33
LSM4-205ENST00000597776 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
LSM4-205ENST00000597776 PRRT2Q7Z6L0 340 aaPredicted RBP13□□□□□ -0.33
LSM4-205ENST00000597776 TMEM57Q8N5G2 664 aa13□□□□□ -0.33
LSM4-205ENST00000597776 PARK7Q99497 189 aaKnown RBP13□□□□□ -0.33
LSM4-205ENST00000597776 SRRDQ9UH36 339 aa13□□□□□ -0.33
LSM4-205ENST00000597776 DOCK1Q14185 1865 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 TRIM75PA6NK02 468 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 GNRH1P01148 92 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
LSM4-205ENST00000597776 MCAMP43121 646 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 PRMT2P55345 433 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
LSM4-205ENST00000597776 NSUN4Q96CB9 384 aaKnown RBP12.99□□□□□ -0.33
LSM4-205ENST00000597776 RAI14Q9P0K7 980 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 AFG3L2Q9Y4W6 797 aa12.99□□□□□ -0.33
LSM4-205ENST00000597776 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
LSM4-205ENST00000597776 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
LSM4-205ENST00000597776 BCRP11274 1271 aa12.98□□□□□ -0.33
LSM4-205ENST00000597776 MTFR1Q15390 333 aa12.98□□□□□ -0.33
LSM4-205ENST00000597776 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
LSM4-205ENST00000597776 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
LSM4-205ENST00000597776 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
LSM4-205ENST00000597776 GSTO1P78417 241 aa12.97□□□□□ -0.33
LSM4-205ENST00000597776 PRKCZQ05513 592 aa12.97□□□□□ -0.33
LSM4-205ENST00000597776 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
LSM4-205ENST00000597776 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
LSM4-205ENST00000597776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.33
LSM4-205ENST00000597776 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
LSM4-205ENST00000597776 PTPRFP10586 1907 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 LDHCP07864 332 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 UQCRFS1P1P0C7P4 283 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 HOXD10P28358 340 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 GRK4P32298 578 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 FCGRTP55899 365 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 POLA2Q14181 598 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 SH3RF3Q8TEJ3 882 aaPredicted RBP12.96□□□□□ -0.33
LSM4-205ENST00000597776 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 SHISA4Q96DD7 197 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 OSBPL5Q9H0X9 879 aaPredicted RBP12.96□□□□□ -0.33
LSM4-205ENST00000597776 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 GABRQQ9UN88 632 aa12.96□□□□□ -0.33
LSM4-205ENST00000597776 TBC1D12O60347 775 aa12.95□□□□□ -0.34
LSM4-205ENST00000597776 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSM4-205ENST00000597776 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 RRP1BQ14684 758 aaKnown RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
LSM4-205ENST00000597776 HABP4Q5JVS0 413 aaKnown RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 TTC39AQ5SRH9 613 aa12.95□□□□□ -0.34
LSM4-205ENST00000597776 TREML2Q5T2D2 321 aa12.95□□□□□ -0.34
LSM4-205ENST00000597776 SMCR8Q8TEV9 937 aaPredicted RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 BIN2Q9UBW5 565 aaPredicted RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
LSM4-205ENST00000597776 COL2A1P02458 1487 aaPredicted RBP12.95□□□□□ -0.34
LSM4-205ENST00000597776 MGAMO43451 1857 aa12.94□□□□□ -0.34
LSM4-205ENST00000597776 RLBP1P12271 317 aa12.94□□□□□ -0.34
LSM4-205ENST00000597776 CCL5P13501 91 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms