RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TEX11Q8IYF3 940 aa20.34■□□□□ 0.85
SSBP4-204ENST00000597724 MAGEB6Q8N7X4 407 aa20.34■□□□□ 0.85
SSBP4-204ENST00000597724 HAUS7Q99871 368 aa20.34■□□□□ 0.85
SSBP4-204ENST00000597724 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
SSBP4-204ENST00000597724 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
SSBP4-204ENST00000597724 DDTLA6NHG4 134 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-204ENST00000597724 CA12O43570 354 aa20.33■□□□□ 0.85
SSBP4-204ENST00000597724 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-204ENST00000597724 MKRN3Q13064 507 aaKnown RBP20.33■□□□□ 0.85
SSBP4-204ENST00000597724 EDC3Q96F86 508 aaKnown RBP20.33■□□□□ 0.85
SSBP4-204ENST00000597724 WNK4Q96J92 1243 aa20.33■□□□□ 0.85
SSBP4-204ENST00000597724 ZNF341Q9BYN7 854 aa20.33■□□□□ 0.85
SSBP4-204ENST00000597724 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.85
SSBP4-204ENST00000597724 HSPA8P11142 646 aaKnown RBP20.32■□□□□ 0.84
SSBP4-204ENST00000597724 DYNLL1P63167 89 aaKnown RBP20.32■□□□□ 0.84
SSBP4-204ENST00000597724 VGLL4Q14135 290 aa20.32■□□□□ 0.84
SSBP4-204ENST00000597724 ZSCAN29Q8IWY8 852 aaPredicted RBP20.32■□□□□ 0.84
SSBP4-204ENST00000597724 GCC1Q96CN9 775 aa20.32■□□□□ 0.84
SSBP4-204ENST00000597724 WRNIP1Q96S55 665 aa20.32■□□□□ 0.84
SSBP4-204ENST00000597724 ELP3Q9H9T3 547 aa20.32■□□□□ 0.84
SSBP4-204ENST00000597724 ZNF112Q9UJU3 913 aa20.32■□□□□ 0.84
SSBP4-204ENST00000597724 ATRNL1Q5VV63 1379 aa20.32■□□□□ 0.84
SSBP4-204ENST00000597724 TM4SF4P48230 202 aa20.31■□□□□ 0.84
SSBP4-204ENST00000597724 MAP3K10Q02779 954 aa20.31■□□□□ 0.84
SSBP4-204ENST00000597724 SLC9C2Q5TAH2 1124 aa20.31■□□□□ 0.84
SSBP4-204ENST00000597724 MIGA1Q8NAN2 632 aa20.31■□□□□ 0.84
SSBP4-204ENST00000597724 ZKSCAN4Q969J2 545 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-204ENST00000597724 GPATCH3Q96I76 525 aa20.31■□□□□ 0.84
SSBP4-204ENST00000597724 OSBPL5Q9H0X9 879 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-204ENST00000597724 CSADQ9Y600 493 aa20.31■□□□□ 0.84
SSBP4-204ENST00000597724 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-204ENST00000597724 PDE6AP16499 860 aa20.3■□□□□ 0.84
SSBP4-204ENST00000597724 GJA5P36382 358 aa20.3■□□□□ 0.84
SSBP4-204ENST00000597724 LBX1P52954 281 aa20.3■□□□□ 0.84
SSBP4-204ENST00000597724 CERS3Q8IU89 383 aa20.3■□□□□ 0.84
SSBP4-204ENST00000597724 RWDD1Q9H446 243 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-204ENST00000597724 SNCAIPQ9Y6H5 919 aa20.3■□□□□ 0.84
SSBP4-204ENST00000597724 INPP5BP32019 993 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 SREBF2Q12772 1141 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 ANKRD45Q5TZF3 282 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 PRDM10Q9NQV6 1147 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 RNF186Q9NXI6 227 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 SAGE1Q9NXZ1 904 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 TSKSQ9UJT2 592 aa20.29■□□□□ 0.84
SSBP4-204ENST00000597724 TCRBV5S4A2TA0A5A2 114 aa20.28■□□□□ 0.84
SSBP4-204ENST00000597724 MANSC4A6NHS7 340 aaPredicted RBP20.28■□□□□ 0.84
SSBP4-204ENST00000597724 PHF20L1A8MW92 1017 aa20.28■□□□□ 0.84
SSBP4-204ENST00000597724 INHBEP58166 350 aa20.28■□□□□ 0.84
SSBP4-204ENST00000597724 COL13A1Q5TAT6 717 aaPredicted RBP20.28■□□□□ 0.84
SSBP4-204ENST00000597724 OTUD7AQ8TE49 926 aaPredicted RBP20.28■□□□□ 0.84
SSBP4-204ENST00000597724 CNKSR2Q8WXI2 1034 aa20.28■□□□□ 0.84
SSBP4-204ENST00000597724 CDK5RAP2Q96SN8 1893 aa20.28■□□□□ 0.84
SSBP4-204ENST00000597724 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 LAMB1P07942 1786 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 SPDYE5A6NIY4 337 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 TBC1D12O60347 775 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 TRPA1O75762 1119 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 IGHDP01880 384 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 SLURP2P0DP57 97 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 TSHZ3Q63HK5 1081 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 ERO1BQ86YB8 467 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 MAPKAPK5Q8IW41 473 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 SMC5Q8IY18 1101 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 RIOK1Q9BRS2 568 aaKnown RBP20.27■□□□□ 0.84
SSBP4-204ENST00000597724 DHX36Q9H2U1 1008 aaKnown RBP20.27■□□□□ 0.84
SSBP4-204ENST00000597724 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
SSBP4-204ENST00000597724 FOCADQ5VW36 1801 aa20.27■□□□□ 0.84
SSBP4-204ENST00000597724 FLT1P17948 1338 aa20.27■□□□□ 0.83
SSBP4-204ENST00000597724 MAGEB6P1A0A0J9YX57 407 aa20.26■□□□□ 0.83
SSBP4-204ENST00000597724 ADD2P35612 726 aa20.26■□□□□ 0.83
SSBP4-204ENST00000597724 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
SSBP4-204ENST00000597724 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.26■□□□□ 0.835e-8■■■■■ 29.8
SSBP4-204ENST00000597724 SALL3Q9BXA9 1300 aa20.26■□□□□ 0.83
SSBP4-204ENST00000597724 NOL9Q5SY16 702 aaKnown RBP20.25■□□□□ 0.83
SSBP4-204ENST00000597724 PI4K2BQ8TCG2 481 aa20.25■□□□□ 0.83
SSBP4-204ENST00000597724 OTUD5Q96G74 571 aa20.25■□□□□ 0.83
SSBP4-204ENST00000597724 MS4A4AQ96JQ5 239 aa20.25■□□□□ 0.83
SSBP4-204ENST00000597724 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-204ENST00000597724 ERC2O15083 957 aa20.24■□□□□ 0.83
SSBP4-204ENST00000597724 MX1P20591 662 aa20.24■□□□□ 0.83
SSBP4-204ENST00000597724 PI4KBQ9UBF8 816 aa20.24■□□□□ 0.83
SSBP4-204ENST00000597724 GLRX3O76003 335 aaKnown RBP20.23■□□□□ 0.83
SSBP4-204ENST00000597724 USP5P45974 858 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 PPATQ06203 517 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 UBE3CQ15386 1083 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 SLFNL1Q499Z3 407 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 IFNL1Q8IU54 200 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.23■□□□□ 0.83
SSBP4-204ENST00000597724 HERC5Q9UII4 1024 aaKnown RBP20.23■□□□□ 0.83
SSBP4-204ENST00000597724 PALD1Q9ULE6 856 aa20.23■□□□□ 0.83
SSBP4-204ENST00000597724 MYH7P12883 1935 aa20.22■□□□□ 0.83
SSBP4-204ENST00000597724 FAM196BA6NMK8 535 aa20.22■□□□□ 0.83
SSBP4-204ENST00000597724 CTNND1O60716 968 aaKnown RBP20.22■□□□□ 0.83
SSBP4-204ENST00000597724 CHGBP05060 677 aa20.22■□□□□ 0.83
SSBP4-204ENST00000597724 GTF2A2P52657 109 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms