RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.65■□□□□ 0.58
USE1-206ENST00000595101 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
USE1-206ENST00000595101 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
USE1-206ENST00000595101 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
USE1-206ENST00000595101 RIOK1Q9BRS2 568 aaKnown RBP18.65■□□□□ 0.58
USE1-206ENST00000595101 TTC41PQ6P2S7 1318 aa18.64■□□□□ 0.57
USE1-206ENST00000595101 ADD2P35612 726 aa18.64■□□□□ 0.57
USE1-206ENST00000595101 ZSCAN29Q8IWY8 852 aaPredicted RBP18.64■□□□□ 0.57
USE1-206ENST00000595101 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
USE1-206ENST00000595101 CSRNP1Q96S65 589 aa18.64■□□□□ 0.57
USE1-206ENST00000595101 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.57
USE1-206ENST00000595101 ZBTB47Q9UFB7 747 aaPredicted RBP18.64■□□□□ 0.57
USE1-206ENST00000595101 ATRNL1Q5VV63 1379 aa18.64■□□□□ 0.57
USE1-206ENST00000595101 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
USE1-206ENST00000595101 IREB2P48200 963 aaKnown RBP18.63■□□□□ 0.57
USE1-206ENST00000595101 PDE1AP54750 535 aa18.63■□□□□ 0.57
USE1-206ENST00000595101 SLC4A8Q2Y0W8 1093 aa18.63■□□□□ 0.57
USE1-206ENST00000595101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.63■□□□□ 0.57
USE1-206ENST00000595101 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
USE1-206ENST00000595101 CCDC102AQ96A19 550 aa18.63■□□□□ 0.57
USE1-206ENST00000595101 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
USE1-206ENST00000595101 FAM196BA6NMK8 535 aa18.63■□□□□ 0.57
USE1-206ENST00000595101 KIF23Q02241 960 aaPredicted RBP18.63■□□□□ 0.57
USE1-206ENST00000595101 DOCK2Q92608 1830 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 FLT1P17948 1338 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 IGSF3O75054 1194 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 HSPA1AP0DMV8 641 aaKnown RBP18.62■□□□□ 0.57
USE1-206ENST00000595101 HSPA1BP0DMV9 641 aaKnown RBP18.62■□□□□ 0.57
USE1-206ENST00000595101 INPP5BP32019 993 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 GJA5P36382 358 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 VGLL4Q14135 290 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 SLC10A4Q96EP9 437 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 WRNIP1Q96S55 665 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 ELP3Q9H9T3 547 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
USE1-206ENST00000595101 GLRX3O76003 335 aaKnown RBP18.61■□□□□ 0.57
USE1-206ENST00000595101 MAP3K9P80192 1104 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 NOGQ13253 232 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 ANKRD13AQ8IZ07 590 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 KBTBD3Q8NAB2 608 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 ARMT1Q9H993 441 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
USE1-206ENST00000595101 PALD1Q9ULE6 856 aa18.61■□□□□ 0.57
USE1-206ENST00000595101 MAGEB6P1A0A0J9YX57 407 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 ERC2O15083 957 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 NPM3O75607 178 aaKnown RBP18.6■□□□□ 0.57
USE1-206ENST00000595101 PLCG2P16885 1265 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 MAP2K2P36507 400 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 PUS7LQ9H0K6 701 aaKnown RBP18.6■□□□□ 0.57
USE1-206ENST00000595101 PRKAB2O43741 272 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 EVX2Q03828 476 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 SPRYD7Q5W111 196 aa18.6■□□□□ 0.57
USE1-206ENST00000595101 PHF20L1A8MW92 1017 aa18.59■□□□□ 0.57
USE1-206ENST00000595101 PDE4AP27815 886 aa18.59■□□□□ 0.57
USE1-206ENST00000595101 DCAF15Q66K64 600 aa18.59■□□□□ 0.57
USE1-206ENST00000595101 SDR42E1Q8WUS8 393 aa18.59■□□□□ 0.57
USE1-206ENST00000595101 ZNF341Q9BYN7 854 aa18.59■□□□□ 0.57
USE1-206ENST00000595101 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.57
USE1-206ENST00000595101 SNCAIPQ9Y6H5 919 aa18.59■□□□□ 0.57
USE1-206ENST00000595101 FOXN1O15353 648 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 MBD4O95243 580 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 UBE3CQ15386 1083 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 OSBP2Q969R2 916 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 WNK4Q96J92 1243 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.57
USE1-206ENST00000595101 TSKSQ9UJT2 592 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 ZNF112Q9UJU3 913 aa18.58■□□□□ 0.57
USE1-206ENST00000595101 USP5P45974 858 aa18.58■□□□□ 0.56
USE1-206ENST00000595101 MAP3K10Q02779 954 aa18.58■□□□□ 0.56
USE1-206ENST00000595101 RRP1BQ14684 758 aaKnown RBP18.58■□□□□ 0.56
USE1-206ENST00000595101 OPTNQ96CV9 577 aa18.58■□□□□ 0.56
USE1-206ENST00000595101 MAP2K1Q02750 393 aaPredicted RBP18.57■□□□□ 0.56
USE1-206ENST00000595101 HOOK2Q96ED9 719 aa18.57■□□□□ 0.56
USE1-206ENST00000595101 SEC62Q99442 399 aaKnown RBP18.57■□□□□ 0.56
USE1-206ENST00000595101 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
USE1-206ENST00000595101 SMIM22K7EJ46 135 aa18.56■□□□□ 0.56
USE1-206ENST00000595101 RNF113AO15541 343 aaKnown RBP18.56■□□□□ 0.56
USE1-206ENST00000595101 TMED8Q6PL24 325 aaPredicted RBP18.56■□□□□ 0.56
USE1-206ENST00000595101 CSADQ9Y600 493 aa18.56■□□□□ 0.56
USE1-206ENST00000595101 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
USE1-206ENST00000595101 OTOFQ9HC10 1997 aa18.56■□□□□ 0.56
USE1-206ENST00000595101 AK9Q5TCS8 1911 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 OTUD5Q96G74 571 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 FSD1Q9BTV5 496 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.55■□□□□ 0.56
USE1-206ENST00000595101 UNCXA6NJT0 531 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 M0R2C6 588 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 PLCD1P51178 756 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 SHROOM1Q2M3G4 852 aaPredicted RBP18.55■□□□□ 0.56
USE1-206ENST00000595101 ZSCAN25Q6NSZ9 544 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
USE1-206ENST00000595101 SKAP1Q86WV1 359 aa18.55■□□□□ 0.56
USE1-206ENST00000595101 CRNKL1Q9BZJ0 848 aaKnown RBP18.55■□□□□ 0.56
USE1-206ENST00000595101 DCP1AQ9NPI6 582 aaPredicted RBP18.55■□□□□ 0.56
USE1-206ENST00000595101 AIDAQ96BJ3 306 aa18.54■□□□□ 0.56
USE1-206ENST00000595101 DHX36Q9H2U1 1008 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms