RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 CYP2E1P05181 493 aaPredicted RBP18.48■□□□□ 0.55
TRIM28-205ENST00000595028 LDHCP07864 332 aa18.48■□□□□ 0.55
TRIM28-205ENST00000595028 TM4SF4P48230 202 aa18.48■□□□□ 0.55
TRIM28-205ENST00000595028 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
TRIM28-205ENST00000595028 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
TRIM28-205ENST00000595028 FOCADQ5VW36 1801 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 ATRNL1Q5VV63 1379 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 MANSC4A6NHS7 340 aaPredicted RBP18.47■□□□□ 0.55
TRIM28-205ENST00000595028 APBB1O00213 710 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 RAB11FIP3O75154 756 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 GJA5P36382 358 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 ZAP70P43403 619 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 RHBDL3P58872 404 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
TRIM28-205ENST00000595028 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
TRIM28-205ENST00000595028 WRNIP1Q96S55 665 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 CSADQ9Y600 493 aa18.47■□□□□ 0.55
TRIM28-205ENST00000595028 IGSF3O75054 1194 aa18.46■□□□□ 0.55
TRIM28-205ENST00000595028 ZFPM1Q8IX07 1006 aa18.46■□□□□ 0.55
TRIM28-205ENST00000595028 OPTNQ96CV9 577 aa18.46■□□□□ 0.55
TRIM28-205ENST00000595028 ZNF341Q9BYN7 854 aa18.46■□□□□ 0.55
TRIM28-205ENST00000595028 DDX4Q9NQI0 724 aaKnown RBP18.46■□□□□ 0.55
TRIM28-205ENST00000595028 PIH1D3Q9NQM4 214 aaKnown RBP18.46■□□□□ 0.55
TRIM28-205ENST00000595028 SNCAIPQ9Y6H5 919 aa18.46■□□□□ 0.55
TRIM28-205ENST00000595028 COL2A1P02458 1487 aaPredicted RBP18.46■□□□□ 0.54
TRIM28-205ENST00000595028 POTEFA5A3E0 1075 aa18.45■□□□□ 0.54
TRIM28-205ENST00000595028 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-205ENST00000595028 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-205ENST00000595028 SPDYE5A6NIY4 337 aa18.44■□□□□ 0.54
TRIM28-205ENST00000595028 FKTNO75072 461 aa18.44■□□□□ 0.54
TRIM28-205ENST00000595028 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
TRIM28-205ENST00000595028 PICALMQ13492 652 aa18.44■□□□□ 0.54
TRIM28-205ENST00000595028 MIGA2Q7L4E1 593 aa18.44■□□□□ 0.54
TRIM28-205ENST00000595028 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
TRIM28-205ENST00000595028 DOCK1Q14185 1865 aa18.43■□□□□ 0.54
TRIM28-205ENST00000595028 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
TRIM28-205ENST00000595028 INHBEP58166 350 aa18.43■□□□□ 0.54
TRIM28-205ENST00000595028 SH3BP5LQ7L8J4 393 aa18.43■□□□□ 0.54
TRIM28-205ENST00000595028 ADGRA1Q86SQ6 560 aa18.43■□□□□ 0.54
TRIM28-205ENST00000595028 ZKSCAN4Q969J2 545 aaPredicted RBP18.43■□□□□ 0.54
TRIM28-205ENST00000595028 NOL10Q9BSC4 688 aaKnown RBP18.43■□□□□ 0.54
TRIM28-205ENST00000595028 R3HDMLQ9H3Y0 253 aa18.43■□□□□ 0.54
TRIM28-205ENST00000595028 NDUFB9Q9Y6M9 179 aa18.43■□□□□ 0.54
TRIM28-205ENST00000595028 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
TRIM28-205ENST00000595028 IGF2BP3O00425 579 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM28-205ENST00000595028 ALDH1A1P00352 501 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 INPP5BP32019 993 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 IFNL1Q8IU54 200 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM28-205ENST00000595028 OTUD5Q96G74 571 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 CFHR5Q9BXR6 569 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 AATFQ9NY61 560 aaKnown RBP eCLIP18.42■□□□□ 0.542e-7■■■■■ 30.4
TRIM28-205ENST00000595028 ZNF112Q9UJU3 913 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
TRIM28-205ENST00000595028 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
TRIM28-205ENST00000595028 TESPA1A2RU30 521 aaPredicted RBP18.41■□□□□ 0.54
TRIM28-205ENST00000595028 DDTLA6NHG4 134 aaPredicted RBP18.41■□□□□ 0.54
TRIM28-205ENST00000595028 IDH1O75874 414 aaKnown RBP18.41■□□□□ 0.54
TRIM28-205ENST00000595028 BAG3O95817 575 aa18.41■□□□□ 0.54
TRIM28-205ENST00000595028 ERO1BQ86YB8 467 aa18.41■□□□□ 0.54
TRIM28-205ENST00000595028 ZSCAN29Q8IWY8 852 aaPredicted RBP18.41■□□□□ 0.54
TRIM28-205ENST00000595028 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
TRIM28-205ENST00000595028 LRRCC1Q9C099 1032 aa18.41■□□□□ 0.54
TRIM28-205ENST00000595028 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
TRIM28-205ENST00000595028 PLCG2P16885 1265 aa18.4■□□□□ 0.54
TRIM28-205ENST00000595028 PPP4CP60510 307 aa18.4■□□□□ 0.54
TRIM28-205ENST00000595028 PPIL2Q13356 520 aa18.4■□□□□ 0.54
TRIM28-205ENST00000595028 NOL9Q5SY16 702 aaKnown RBP18.4■□□□□ 0.54
TRIM28-205ENST00000595028 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
TRIM28-205ENST00000595028 MS4A4AQ96JQ5 239 aa18.4■□□□□ 0.54
TRIM28-205ENST00000595028 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
TRIM28-205ENST00000595028 CEP290O15078 2479 aa18.4■□□□□ 0.54
TRIM28-205ENST00000595028 MYH7P12883 1935 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 CYP7A1P22680 504 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 GTF2A2P52657 109 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 MAP3K12Q12852 859 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
TRIM28-205ENST00000595028 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 ATAD5Q96QE3 1844 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
TRIM28-205ENST00000595028 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 MAP3K10Q02779 954 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 TTF1Q15361 905 aaPredicted RBP18.38■□□□□ 0.53
TRIM28-205ENST00000595028 CCL15Q16663 113 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 MAGEB6Q8N7X4 407 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 BRI3BPQ8WY22 251 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 PTPN18Q99952 460 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
TRIM28-205ENST00000595028 TRIM17Q9Y577 477 aa18.38■□□□□ 0.53
TRIM28-205ENST00000595028 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
TRIM28-205ENST00000595028 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 PTPRFP10586 1907 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 MYH1P12882 1939 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 IRF6O14896 467 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 PPATQ06203 517 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 OTUD7BQ6GQQ9 843 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 CRBNQ96SW2 442 aa18.37■□□□□ 0.53
TRIM28-205ENST00000595028 DNAJC2Q99543 621 aaKnown RBP18.37■□□□□ 0.53
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