RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-215	ENST00000593098	TMEM94	Q12767	1356 aa		3.02	□□□□□ -1.93
PIK3C3-215	ENST00000593098	FAM221A	A4D161	298 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098		A6NHS1	94 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ENC1	O14682	589 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CPNE3	O75131	537 aa	Known RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	LYPD4	Q6UWN0	246 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PI16	Q6UXB8	463 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CACTIN-AS1	Q8N1I8	211 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PIK3R5	Q8WYR1	880 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	MRRF	Q96E11	262 aa	Known RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	LATS2	Q9NRM7	1088 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PPM1H	Q9ULR3	514 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	LTBP1	Q14766	1721 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SBF1	O95248	1867 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	GRIA4	P48058	902 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	RPS26	P62854	115 aa	Known RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	RBM6	P78332	1123 aa	Known RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SV2A	Q7L0J3	742 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	WHAMM	Q8TF30	809 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SMG6	Q86US8	1419 aa	Known RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	COL5A3	P25940	1745 aa	Predicted RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	OIP5	O43482	229 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	NDUFB5	O43674	189 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	GMPR	P36959	345 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CEBPA	P49715	358 aa	Predicted RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SPEM2	Q0P670	501 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SV2B	Q7L1I2	683 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	WNT8B	Q93098	351 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ZNF775	Q96BV0	537 aa	Predicted RBP	3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SLC6A14	Q9UN76	642 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	LAMB4	A4D0S4	1761 aa		3.01	□□□□□ -1.93
PIK3C3-215	ENST00000593098	MEGF11	A6BM72	1044 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	NTF4	P34130	210 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	MICALL1	Q8N3F8	863 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	VWCE	Q96DN2	955 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	TRIM56	Q9BRZ2	755 aa	Known RBP	3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	UPP2	O95045	317 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ACPP	P15309	386 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CD33	P20138	364 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	MAP2K3	P46734	347 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	RGS19	P49795	217 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	RBL2	Q08999	1139 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CCDC84	Q86UT8	332 aa	Predicted RBP	3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	JMY	Q8N9B5	988 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	RBBP8NL	Q8NC74	664 aa	Predicted RBP	3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	POP1	Q99575	1024 aa	Known RBP	3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	LOC100996750	A0A140TA64	210 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	TMEM238L	A0A1B0GVL6	79 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	FIGNL2	A6NMB9	653 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	FGD1	P98174	961 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PSME1	Q06323	249 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	KANK3	Q6NY19	840 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ARMC5	Q96C12	935 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	KRTAP4-6	Q9BYQ5	205 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	BACH2	Q9BYV9	841 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	BRPF3	Q9ULD4	1205 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SSC5D	A1L4H1	1573 aa		3	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CELA2B	P08218	269 aa	Predicted RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	TARS	P26639	723 aa	Known RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PERM1	Q5SV97	790 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SYT9	Q86SS6	491 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	VWA5B2	Q8N398	1253 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	NIF3L1	Q9GZT8	377 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	BTAF1	O14981	1849 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	GFRA2	O00451	464 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SASH3	O75995	380 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ATE1	O95260	518 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ZNF423	Q2M1K9	1284 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	UBR3	Q6ZT12	1888 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ANKLE2	Q86XL3	938 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	THEMIS	Q8N1K5	641 aa	Predicted RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	GPR152	Q8TDT2	470 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	GAL3ST3	Q96A11	431 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	NGLY1	Q96IV0	654 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	COL25A1	Q9BXS0	654 aa	Predicted RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PBX4	Q9BYU1	374 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	TGIF2	Q9GZN2	237 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	TIAM2	Q8IVF5	1701 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	PNMA6F	A0A0J9YX94	578 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	DEAF1	O75398	565 aa	Predicted RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SOX9	P48436	509 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	EAPP	Q56P03	285 aa	Predicted RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CRELD1	Q96HD1	420 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	NECAB3	Q96P71	396 aa	Predicted RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	DUSP9	Q99956	384 aa	Known RBP	2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	FAM8A1	Q9UBU6	413 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	TACC3	Q9Y6A5	838 aa		2.99	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ELOA3C	A0A087WX78	387 aa	Predicted RBP	2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ELOA3D	A6NLF2	546 aa	Predicted RBP	2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	NEFL	P07196	543 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	XRCC5	P13010	732 aa	Known RBP	2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	CAP2	P40123	477 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	AFF1	P51825	1210 aa	Known RBP	2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ELOA3B	Q3SY89	546 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	SEZ6L2	Q6UXD5	910 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	AGMO	Q6ZNB7	445 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	ELOA3	Q8NG57	546 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	HHIP	Q96QV1	700 aa		2.98	□□□□□ -1.93
PIK3C3-215	ENST00000593098	MUC3B	Q9H195	1237 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms