RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 AATFQ9NY61 560 aaKnown RBP eCLIP27.26■■□□□ 1.95
MBD3-208ENST00000590830 ZNF112Q9UJU3 913 aa27.26■■□□□ 1.95
MBD3-208ENST00000590830 IGSF3O75054 1194 aa27.25■■□□□ 1.95
MBD3-208ENST00000590830 NPM3O75607 178 aaKnown RBP27.25■■□□□ 1.95
MBD3-208ENST00000590830 MAP4K4O95819 1239 aaPredicted RBP27.25■■□□□ 1.95
MBD3-208ENST00000590830 OPTNQ96CV9 577 aa27.25■■□□□ 1.95
MBD3-208ENST00000590830 SNCAIPQ9Y6H5 919 aa27.25■■□□□ 1.95
MBD3-208ENST00000590830 CYP7A1P22680 504 aa27.24■■□□□ 1.95
MBD3-208ENST00000590830 INPP5BP32019 993 aa27.24■■□□□ 1.95
MBD3-208ENST00000590830 TEX11Q8IYF3 940 aa27.24■■□□□ 1.95
MBD3-208ENST00000590830 EDC3Q96F86 508 aaKnown RBP27.24■■□□□ 1.95
MBD3-208ENST00000590830 MYO5AQ9Y4I1 1855 aaKnown RBP27.23■■□□□ 1.95
MBD3-208ENST00000590830 OTOFQ9HC10 1997 aa27.23■■□□□ 1.95
MBD3-208ENST00000590830 ATP5JP18859 108 aa27.23■■□□□ 1.95
MBD3-208ENST00000590830 DYNLL1P63167 89 aaKnown RBP27.23■■□□□ 1.95
MBD3-208ENST00000590830 MAP3K10Q02779 954 aa27.23■■□□□ 1.95
MBD3-208ENST00000590830 MAGEB6Q8N7X4 407 aa27.23■■□□□ 1.95
MBD3-208ENST00000590830 BOLA2Q9H3K6 86 aa27.23■■□□□ 1.95
MBD3-208ENST00000590830 CSADQ9Y600 493 aa27.23■■□□□ 1.95
MBD3-208ENST00000590830 MANSC4A6NHS7 340 aaPredicted RBP27.22■■□□□ 1.95
MBD3-208ENST00000590830 BAG3O95817 575 aa27.22■■□□□ 1.95
MBD3-208ENST00000590830 ZSCAN29Q8IWY8 852 aaPredicted RBP27.22■■□□□ 1.95
MBD3-208ENST00000590830 PHF20L1A8MW92 1017 aa27.21■■□□□ 1.95
MBD3-208ENST00000590830 GOLIM4O00461 696 aa27.21■■□□□ 1.95
MBD3-208ENST00000590830 SREBF2Q12772 1141 aa27.21■■□□□ 1.95
MBD3-208ENST00000590830 MS4A4AQ96JQ5 239 aa27.21■■□□□ 1.95
MBD3-208ENST00000590830 DNAJC2Q99543 621 aaKnown RBP27.21■■□□□ 1.95
MBD3-208ENST00000590830 SPDYE5A6NIY4 337 aa27.2■■□□□ 1.94
MBD3-208ENST00000590830 MAP3K12Q12852 859 aa27.2■■□□□ 1.94
MBD3-208ENST00000590830 TNS4Q8IZW8 715 aa27.2■■□□□ 1.94
MBD3-208ENST00000590830 NOL10Q9BSC4 688 aaKnown RBP27.2■■□□□ 1.94
MBD3-208ENST00000590830 OSBPL5Q9H0X9 879 aaPredicted RBP27.2■■□□□ 1.94
MBD3-208ENST00000590830 TESPA1A2RU30 521 aaPredicted RBP27.19■■□□□ 1.94
MBD3-208ENST00000590830 IGF2BP3O00425 579 aaKnown RBP eCLIP27.19■■□□□ 1.94
MBD3-208ENST00000590830 TBC1D8O95759 1140 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 INHBEP58166 350 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 MIGA1Q8NAN2 632 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 OTUD5Q96G74 571 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 HAUS7Q99871 368 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 PTPN18Q99952 460 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 R3HDMLQ9H3Y0 253 aa27.19■■□□□ 1.94
MBD3-208ENST00000590830 SUPT16HQ9Y5B9 1047 aaKnown RBP27.19■■□□□ 1.94
MBD3-208ENST00000590830 MAST2Q6P0Q8 1798 aa27.18■■□□□ 1.94
MBD3-208ENST00000590830 TTF1Q15361 905 aaPredicted RBP27.18■■□□□ 1.94
MBD3-208ENST00000590830 ERO1BQ86YB8 467 aa27.18■■□□□ 1.94
MBD3-208ENST00000590830 IFNL1Q8IU54 200 aa27.18■■□□□ 1.94
MBD3-208ENST00000590830 TGFBRAP1Q8WUH2 860 aa27.18■■□□□ 1.94
MBD3-208ENST00000590830 PLCG2P16885 1265 aa27.17■■□□□ 1.94
MBD3-208ENST00000590830 MAPKAPK5Q8IW41 473 aa27.17■■□□□ 1.94
MBD3-208ENST00000590830 PDE6AP16499 860 aa27.16■■□□□ 1.94
MBD3-208ENST00000590830 NOL9Q5SY16 702 aaKnown RBP27.16■■□□□ 1.94
MBD3-208ENST00000590830 SLC9C2Q5TAH2 1124 aa27.16■■□□□ 1.94
MBD3-208ENST00000590830 EXOC6Q8TAG9 804 aa27.16■■□□□ 1.94
MBD3-208ENST00000590830 PAG1Q9NWQ8 432 aa27.16■■□□□ 1.94
MBD3-208ENST00000590830 TCRBV5S4A2TA0A5A2 114 aa27.15■■□□□ 1.94
MBD3-208ENST00000590830 IRF6O14896 467 aa27.15■■□□□ 1.94
MBD3-208ENST00000590830 BRI3BPQ8WY22 251 aa27.15■■□□□ 1.94
MBD3-208ENST00000590830 ECHDC1Q9NTX5 307 aa27.15■■□□□ 1.94
MBD3-208ENST00000590830 AK9Q5TCS8 1911 aa27.15■■□□□ 1.94
MBD3-208ENST00000590830 FAM196BA6NMK8 535 aa27.14■■□□□ 1.94
MBD3-208ENST00000590830 TBC1D12O60347 775 aa27.14■■□□□ 1.94
MBD3-208ENST00000590830 HDAC1Q13547 482 aaPredicted RBP27.14■■□□□ 1.94
MBD3-208ENST00000590830 SLFNL1Q499Z3 407 aa27.14■■□□□ 1.94
MBD3-208ENST00000590830 TSHZ3Q63HK5 1081 aa27.14■■□□□ 1.94
MBD3-208ENST00000590830 TMED8Q6PL24 325 aaPredicted RBP27.14■■□□□ 1.94
MBD3-208ENST00000590830 RIOK1Q9BRS2 568 aaKnown RBP27.14■■□□□ 1.94
MBD3-208ENST00000590830 FLT1P17948 1338 aa27.14■■□□□ 1.93
MBD3-208ENST00000590830 DOCK2Q92608 1830 aa27.13■■□□□ 1.93
MBD3-208ENST00000590830 COL2A1P02458 1487 aaPredicted RBP27.13■■□□□ 1.93
MBD3-208ENST00000590830 CHGBP05060 677 aa27.13■■□□□ 1.93
MBD3-208ENST00000590830 PPIL2Q13356 520 aa27.13■■□□□ 1.93
MBD3-208ENST00000590830 IFFO2Q5TF58 517 aa27.13■■□□□ 1.93
MBD3-208ENST00000590830 OTUD7AQ8TE49 926 aaPredicted RBP27.13■■□□□ 1.93
MBD3-208ENST00000590830 CFHR5Q9BXR6 569 aa27.13■■□□□ 1.93
MBD3-208ENST00000590830 ZNF532Q9HCE3 1301 aa27.13■■□□□ 1.93
MBD3-208ENST00000590830 GTF2A2P52657 109 aa27.12■■□□□ 1.93
MBD3-208ENST00000590830 PPATQ06203 517 aa27.12■■□□□ 1.93
MBD3-208ENST00000590830 CASP8AP2Q9UKL3 1982 aa27.11■■□□□ 1.93
MBD3-208ENST00000590830 CCL15-CCL14A0A0B4J2E2 113 aa27.11■■□□□ 1.93
MBD3-208ENST00000590830 AAMPQ13685 434 aa27.11■■□□□ 1.93
MBD3-208ENST00000590830 RRP1BQ14684 758 aaKnown RBP27.11■■□□□ 1.93
MBD3-208ENST00000590830 CCL15Q16663 113 aa27.11■■□□□ 1.93
MBD3-208ENST00000590830 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.11■■□□□ 1.93
MBD3-208ENST00000590830 PALD1Q9ULE6 856 aa27.11■■□□□ 1.93
MBD3-208ENST00000590830 ALDH1A1P00352 501 aa27.1■■□□□ 1.93
MBD3-208ENST00000590830 SCYL3Q8IZE3 742 aa27.1■■□□□ 1.93
MBD3-208ENST00000590830 DHX36Q9H2U1 1008 aaKnown RBP27.1■■□□□ 1.93
MBD3-208ENST00000590830 PI4KBQ9UBF8 816 aa27.1■■□□□ 1.93
MBD3-208ENST00000590830 SAP30BPQ9UHR5 308 aaKnown RBP27.1■■□□□ 1.93
MBD3-208ENST00000590830 LAMB1P07942 1786 aa27.09■■□□□ 1.93
MBD3-208ENST00000590830 MAGEB6P1A0A0J9YX57 407 aa27.09■■□□□ 1.93
MBD3-208ENST00000590830 GPR25O00155 361 aa27.09■■□□□ 1.93
MBD3-208ENST00000590830 CTNND1O60716 968 aaKnown RBP27.09■■□□□ 1.93
MBD3-208ENST00000590830 ADD2P35612 726 aa27.09■■□□□ 1.93
MBD3-208ENST00000590830 METTL16Q86W50 562 aaKnown RBP27.09■■□□□ 1.93
MBD3-208ENST00000590830 PTPRAP18433 802 aa27.08■■□□□ 1.93
MBD3-208ENST00000590830 SNAPC2Q13487 334 aa27.08■■□□□ 1.93
MBD3-208ENST00000590830 CERS3Q8IU89 383 aa27.08■■□□□ 1.93
MBD3-208ENST00000590830 FAM43AQ8N2R8 423 aa27.08■■□□□ 1.93
MBD3-208ENST00000590830 ZNF296Q8WUU4 475 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms