RNA–Protein interactions for RNA: ENST00000589871.1

RBM42-205, Transcript of RNA binding motif protein 42, human

TSL 5 BASIC

Gene RBM42, Length 1,487 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM42-205	ENST00000589871	HAUS7	Q99871	368 aa		29.26	■■■□□ 2.27
RBM42-205	ENST00000589871	ECHDC1	Q9NTX5	307 aa		29.26	■■■□□ 2.27
RBM42-205	ENST00000589871	PAG1	Q9NWQ8	432 aa		29.26	■■■□□ 2.27
RBM42-205	ENST00000589871	CA12	O43570	354 aa		29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	CTCF	P49711	727 aa	Predicted RBP	29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	MKRN3	Q13064	507 aa	Known RBP	29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	SPRYD7	Q5W111	196 aa		29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	GCC1	Q96CN9	775 aa		29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	ZNF341	Q9BYN7	854 aa		29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	CSAD	Q9Y600	493 aa		29.25	■■■□□ 2.27
RBM42-205	ENST00000589871	WRNIP1	Q96S55	665 aa		29.24	■■■□□ 2.27
RBM42-205	ENST00000589871	ZBTB47	Q9UFB7	747 aa	Predicted RBP	29.24	■■■□□ 2.27
RBM42-205	ENST00000589871	ZBTB48	P10074	688 aa	Predicted RBP	29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	CERS3	Q8IU89	383 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	EDC3	Q96F86	508 aa	Known RBP	29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	VGLL4	Q14135	290 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	SLC9C2	Q5TAH2	1124 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	SH3BP5L	Q7L8J4	393 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	WNK4	Q96J92	1243 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	ELP3	Q9H9T3	547 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	CDK5RAP2	Q96SN8	1893 aa		29.23	■■■□□ 2.27
RBM42-205	ENST00000589871	DDTL	A6NHG4	134 aa	Predicted RBP	29.22	■■■□□ 2.27
RBM42-205	ENST00000589871	RWDD1	Q9H446	243 aa	Predicted RBP	29.22	■■■□□ 2.27
RBM42-205	ENST00000589871	ATRNL1	Q5VV63	1379 aa		29.22	■■■□□ 2.27
RBM42-205	ENST00000589871	ANKRD45	Q5TZF3	282 aa		29.21	■■■□□ 2.27
RBM42-205	ENST00000589871	MIGA1	Q8NAN2	632 aa		29.21	■■■□□ 2.27
RBM42-205	ENST00000589871	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.21	■■■□□ 2.27
RBM42-205	ENST00000589871	FOCAD	Q5VW36	1801 aa		29.2	■■■□□ 2.27
RBM42-205	ENST00000589871	COL2A1	P02458	1487 aa	Predicted RBP	29.2	■■■□□ 2.27
RBM42-205	ENST00000589871	PDE6A	P16499	860 aa		29.2	■■■□□ 2.26
RBM42-205	ENST00000589871	SREBF2	Q12772	1141 aa		29.2	■■■□□ 2.26
RBM42-205	ENST00000589871	DYNLL1	P63167	89 aa	Known RBP	29.19	■■■□□ 2.26
RBM42-205	ENST00000589871	TGFBRAP1	Q8WUH2	860 aa		29.19	■■■□□ 2.26
RBM42-205	ENST00000589871	ZKSCAN4	Q969J2	545 aa	Predicted RBP	29.19	■■■□□ 2.26
RBM42-205	ENST00000589871	OPTN	Q96CV9	577 aa		29.19	■■■□□ 2.26
RBM42-205	ENST00000589871	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	29.19	■■■□□ 2.26
RBM42-205	ENST00000589871	ZNF112	Q9UJU3	913 aa		29.19	■■■□□ 2.26
RBM42-205	ENST00000589871	LAMB1	P07942	1786 aa		29.18	■■■□□ 2.26
RBM42-205	ENST00000589871	HSPA8	P11142	646 aa	Known RBP	29.18	■■■□□ 2.26
RBM42-205	ENST00000589871	LBX1	P52954	281 aa		29.18	■■■□□ 2.26
RBM42-205	ENST00000589871	TTC41P	Q6P2S7	1318 aa		29.18	■■■□□ 2.26
RBM42-205	ENST00000589871	MYH7	P12883	1935 aa		29.18	■■■□□ 2.26
RBM42-205	ENST00000589871	MANSC4	A6NHS7	340 aa	Predicted RBP	29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	TM4SF4	P48230	202 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	TSHZ3	Q63HK5	1081 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	SAGE1	Q9NXZ1	904 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	ZNF532	Q9HCE3	1301 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	INPP5B	P32019	993 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	GJA5	P36382	358 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	IRX6	P78412	446 aa	Predicted RBP	29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	MAP3K10	Q02779	954 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	MAPKAPK5	Q8IW41	473 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	TSKS	Q9UJT2	592 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	SNCAIP	Q9Y6H5	919 aa		29.17	■■■□□ 2.26
RBM42-205	ENST00000589871	FLT1	P17948	1338 aa		29.16	■■■□□ 2.26
RBM42-205	ENST00000589871	INHBE	P58166	350 aa		29.16	■■■□□ 2.26
RBM42-205	ENST00000589871	PRDM10	Q9NQV6	1147 aa		29.16	■■■□□ 2.26
RBM42-205	ENST00000589871	RNF186	Q9NXI6	227 aa		29.16	■■■□□ 2.26
RBM42-205	ENST00000589871	TCRBV5S4A2T	A0A5A2	114 aa		29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	SPDYE5	A6NIY4	337 aa		29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	ERC2	O15083	957 aa		29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	TRPA1	O75762	1119 aa		29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	ERO1B	Q86YB8	467 aa		29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	OTUD7A	Q8TE49	926 aa	Predicted RBP	29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	CNKSR2	Q8WXI2	1034 aa		29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	DHX36	Q9H2U1	1008 aa	Known RBP	29.15	■■■□□ 2.26
RBM42-205	ENST00000589871	MAGEB6P1	A0A0J9YX57	407 aa		29.14	■■■□□ 2.26
RBM42-205	ENST00000589871	MX1	P20591	662 aa		29.14	■■■□□ 2.26
RBM42-205	ENST00000589871	SMC5	Q8IY18	1101 aa		29.14	■■■□□ 2.26
RBM42-205	ENST00000589871	OTUD5	Q96G74	571 aa		29.14	■■■□□ 2.26
RBM42-205	ENST00000589871	RIOK1	Q9BRS2	568 aa	Known RBP	29.14	■■■□□ 2.26
RBM42-205	ENST00000589871	TBC1D12	O60347	775 aa		29.13	■■■□□ 2.25
RBM42-205	ENST00000589871	ADD2	P35612	726 aa		29.13	■■■□□ 2.25
RBM42-205	ENST00000589871	USP5	P45974	858 aa		29.13	■■■□□ 2.25
RBM42-205	ENST00000589871	ZSCAN25	Q6NSZ9	544 aa		29.13	■■■□□ 2.25
RBM42-205	ENST00000589871	PHF20L1	A8MW92	1017 aa		29.12	■■■□□ 2.25
RBM42-205	ENST00000589871	IGHD	P01880	384 aa		29.12	■■■□□ 2.25
RBM42-205	ENST00000589871	PI4KB	Q9UBF8	816 aa		29.12	■■■□□ 2.25
RBM42-205	ENST00000589871	GLRX3	O76003	335 aa	Known RBP	29.11	■■■□□ 2.25
RBM42-205	ENST00000589871	NOL9	Q5SY16	702 aa	Known RBP	29.11	■■■□□ 2.25
RBM42-205	ENST00000589871	COL13A1	Q5TAT6	717 aa	Predicted RBP	29.11	■■■□□ 2.25
RBM42-205	ENST00000589871	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.11	■■■□□ 2.25
RBM42-205	ENST00000589871	MYH1	P12882	1939 aa		29.11	■■■□□ 2.25
RBM42-205	ENST00000589871	SLURP2	P0DP57	97 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	UBE3C	Q15386	1083 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	PI4K2B	Q8TCG2	481 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	PALD1	Q9ULE6	856 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	GTF2A2	P52657	109 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	PPAT	Q06203	517 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	KBTBD3	Q8NAB2	608 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	SALL3	Q9BXA9	1300 aa		29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	HERC5	Q9UII4	1024 aa	Known RBP	29.1	■■■□□ 2.25
RBM42-205	ENST00000589871	PPIL2	Q13356	520 aa		29.09	■■■□□ 2.25
RBM42-205	ENST00000589871	B4GALNT3	Q6L9W6	998 aa		29.09	■■■□□ 2.25
RBM42-205	ENST00000589871	IFNL1	Q8IU54	200 aa		29.09	■■■□□ 2.25
RBM42-205	ENST00000589871	MS4A4A	Q96JQ5	239 aa		29.09	■■■□□ 2.25
RBM42-205	ENST00000589871	SAP30BP	Q9UHR5	308 aa	Known RBP	29.09	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms