RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
CCDC130-211ENST00000589669 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
CCDC130-211ENST00000589669 RDH13Q8NBN7 331 aa16.4■□□□□ 0.22
CCDC130-211ENST00000589669 MEIS3Q99687 375 aa16.4■□□□□ 0.22
CCDC130-211ENST00000589669 LRRFIP2Q9Y608 721 aaKnown RBP16.4■□□□□ 0.22
CCDC130-211ENST00000589669 SLC10A3P09131 477 aa16.39■□□□□ 0.21
CCDC130-211ENST00000589669 CTCFP49711 727 aaPredicted RBP16.39■□□□□ 0.21
CCDC130-211ENST00000589669 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
CCDC130-211ENST00000589669 RGMBQ6NW40 437 aa16.39■□□□□ 0.21
CCDC130-211ENST00000589669 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
CCDC130-211ENST00000589669 ANKK1Q8NFD2 765 aa16.39■□□□□ 0.21
CCDC130-211ENST00000589669 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
CCDC130-211ENST00000589669 LRCH3Q96II8 777 aa16.39■□□□□ 0.21
CCDC130-211ENST00000589669 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
CCDC130-211ENST00000589669 AOC2O75106 756 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 RNF40O75150 1001 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
CCDC130-211ENST00000589669 NOGQ13253 232 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 GRM1Q13255 1194 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 APOBEC3FQ8IUX4 373 aaKnown RBP16.38■□□□□ 0.21
CCDC130-211ENST00000589669 LPIN2Q92539 896 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.38■□□□□ 0.21
CCDC130-211ENST00000589669 POLR2AP24928 1970 aaKnown RBP16.38■□□□□ 0.21
CCDC130-211ENST00000589669 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
CCDC130-211ENST00000589669 FAM155AB1AL88 458 aaPredicted RBP16.37■□□□□ 0.21
CCDC130-211ENST00000589669 BCAMP50895 628 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 MTX1Q13505 466 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 PRMT6Q96LA8 375 aaPredicted RBP16.37■□□□□ 0.21
CCDC130-211ENST00000589669 MRIQ9BWK5 157 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 SCAF8Q9UPN6 1271 aaKnown RBP16.37■□□□□ 0.21
CCDC130-211ENST00000589669 JAG2Q9Y219 1238 aa16.37■□□□□ 0.21
CCDC130-211ENST00000589669 F8W031 263 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-211ENST00000589669 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-211ENST00000589669 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
CCDC130-211ENST00000589669 ZNF157P51786 506 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-211ENST00000589669 PRAMEF18Q5VWM3 479 aa16.36■□□□□ 0.21
CCDC130-211ENST00000589669 TBC1D22AQ8WUA7 517 aa16.36■□□□□ 0.21
CCDC130-211ENST00000589669 WNT2BQ93097 391 aa16.36■□□□□ 0.21
CCDC130-211ENST00000589669 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
CCDC130-211ENST00000589669 CA12O43570 354 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 MYO1BO43795 1136 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
CCDC130-211ENST00000589669 SLC5A1P13866 664 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 SIL1Q9H173 461 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 DEFB129Q9H1M3 183 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 TTF2Q9UNY4 1162 aaKnown RBP16.35■□□□□ 0.21
CCDC130-211ENST00000589669 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 PCDHAC2Q9Y5I4 1007 aa16.35■□□□□ 0.21
CCDC130-211ENST00000589669 ZNF646O15015 1829 aaPredicted RBP16.34■□□□□ 0.21
CCDC130-211ENST00000589669 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 GNAI2P04899 355 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 NF2P35240 595 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 LBX1P52954 281 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
CCDC130-211ENST00000589669 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
CCDC130-211ENST00000589669 SUGT1Q9Y2Z0 365 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 PPP2R3BQ9Y5P8 575 aa16.34■□□□□ 0.21
CCDC130-211ENST00000589669 SRGAP3O43295 1099 aa16.33■□□□□ 0.2
CCDC130-211ENST00000589669 HSPA8P11142 646 aaKnown RBP16.33■□□□□ 0.2
CCDC130-211ENST00000589669 RBM5P52756 815 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC130-211ENST00000589669 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
CCDC130-211ENST00000589669 ZIC5Q96T25 663 aa16.33■□□□□ 0.2
CCDC130-211ENST00000589669 PA2G4Q9UQ80 394 aaKnown RBP16.33■□□□□ 0.2
CCDC130-211ENST00000589669 UBE2Q2LH0YL09 131 aa16.32■□□□□ 0.2
CCDC130-211ENST00000589669 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
CCDC130-211ENST00000589669 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
CCDC130-211ENST00000589669 MOB2Q70IA6 237 aa16.32■□□□□ 0.2
CCDC130-211ENST00000589669 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
CCDC130-211ENST00000589669 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
CCDC130-211ENST00000589669 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
CCDC130-211ENST00000589669 CRKP46108 304 aa16.31■□□□□ 0.2
CCDC130-211ENST00000589669 KIF23Q02241 960 aaPredicted RBP16.31■□□□□ 0.2
CCDC130-211ENST00000589669 GRIK5Q16478 980 aa16.31■□□□□ 0.2
CCDC130-211ENST00000589669 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
CCDC130-211ENST00000589669 WDR66Q8TBY9 1149 aa16.31■□□□□ 0.2
CCDC130-211ENST00000589669 CLRN2A0PK11 232 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 GCGRP47871 477 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 LDLRAD1Q5T700 205 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
CCDC130-211ENST00000589669 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 ZNF70Q9UC06 446 aaPredicted RBP16.3■□□□□ 0.2
CCDC130-211ENST00000589669 AKAP2Q9Y2D5 859 aa16.3■□□□□ 0.2
CCDC130-211ENST00000589669 COL1A1P02452 1464 aaPredicted RBP16.29■□□□□ 0.2
CCDC130-211ENST00000589669 AOX1Q06278 1338 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 UNCXA6NJT0 531 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 ZBTB7BO15156 539 aaPredicted RBP16.29■□□□□ 0.2
CCDC130-211ENST00000589669 TIMM10P62072 90 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 RASA3Q14644 834 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 MAP3K11Q16584 847 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 RASAL3Q86YV0 1011 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 TEKT1Q969V4 418 aa16.29■□□□□ 0.2
CCDC130-211ENST00000589669 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms