RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 WRNIP1Q96S55 665 aa12.98□□□□□ -0.33
CLPTM1-211ENST00000589347 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
CLPTM1-211ENST00000589347 RAI14Q9P0K7 980 aa12.98□□□□□ -0.33
CLPTM1-211ENST00000589347 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
CLPTM1-211ENST00000589347 COG6Q9Y2V7 657 aa12.98□□□□□ -0.33
CLPTM1-211ENST00000589347 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 RFX7Q2KHR2 1363 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 IGSF3O75054 1194 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 MCAMP43121 646 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 MECOMQ03112 1051 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 VGLL4Q14135 290 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 IDI2Q9BXS1 227 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 LRP2BPQ9P2M1 347 aa12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 COL2A1P02458 1487 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-211ENST00000589347 ENTPD3O75355 529 aa12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 IFNL1Q8IU54 200 aa12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 ZSCAN29Q8IWY8 852 aaPredicted RBP12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.33
CLPTM1-211ENST00000589347 UNC80Q8N2C7 3258 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 PLCG2P16885 1265 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 RGS3P49796 1198 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 GTF2A2P52657 109 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 NFIAQ12857 509 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 PI16Q6UXB8 463 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
CLPTM1-211ENST00000589347 MGAMO43451 1857 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 GPR75-ASB3A0A0A6YYF3 556 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 H0YGN5 161 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 BAG3O95817 575 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 CAP1Q01518 475 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 PICALMQ13492 652 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 NAA16Q6N069 864 aaPredicted RBP12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 AACSQ86V21 672 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 CCDC8Q9H0W5 538 aaPredicted RBP12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
CLPTM1-211ENST00000589347 CCL15-CCL14A0A0B4J2E2 113 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 GJA5P36382 358 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 PPIL2Q13356 520 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 CCL15Q16663 113 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 TMED8Q6PL24 325 aaPredicted RBP12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 CERS3Q8IU89 383 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 TEX11Q8IYF3 940 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 LOC285556D6RIA3 1793 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
CLPTM1-211ENST00000589347 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 CETPP11597 493 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 PPATQ06203 517 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 NOL9Q5SY16 702 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 MIGA2Q7L4E1 593 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 SLC17A8Q8NDX2 589 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 RHPN1Q8TCX5 695 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 ZKSCAN4Q969J2 545 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 PRO3102Q9H379 93 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 SNRKQ9NRH2 765 aa12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-211ENST00000589347 APBB1O00213 710 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 ZAP70P43403 619 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 TTF1Q15361 905 aaPredicted RBP12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 EAF2Q96CJ1 260 aaPredicted RBP12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 EFCC1Q9HA90 598 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 ZCCHC17Q9NP64 241 aaKnown RBP12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 ZNF112Q9UJU3 913 aa12.91□□□□□ -0.34
CLPTM1-211ENST00000589347 IDH1O75874 414 aaKnown RBP12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 INPP5BP32019 993 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 RHBDL3P58872 404 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 CRHR2Q13324 411 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms