RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KBTBD3Q8NAB2 608 aa24.48■■□□□ 1.51
DDX39A-207ENST00000588542 ANGEL1Q9UNK9 670 aaKnown RBP24.48■■□□□ 1.51
DDX39A-207ENST00000588542 SIPA1L1O43166 1804 aa24.47■■□□□ 1.51
DDX39A-207ENST00000588542 PPP1R12BO60237 982 aaPredicted RBP24.47■■□□□ 1.51
DDX39A-207ENST00000588542 LDLRAD1Q5T700 205 aa24.47■■□□□ 1.51
DDX39A-207ENST00000588542 PLEKHM2Q8IWE5 1019 aa24.47■■□□□ 1.51
DDX39A-207ENST00000588542 CAPNS2Q96L46 248 aa24.47■■□□□ 1.51
DDX39A-207ENST00000588542 RIOK1Q9BRS2 568 aaKnown RBP24.47■■□□□ 1.51
DDX39A-207ENST00000588542 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.47■■□□□ 1.516e-8■■■□□ 16.2
DDX39A-207ENST00000588542 WDR33Q9C0J8 1336 aaKnown RBP24.46■■□□□ 1.51
DDX39A-207ENST00000588542 RGMBQ6NW40 437 aa24.46■■□□□ 1.51
DDX39A-207ENST00000588542 COL2A1P02458 1487 aaPredicted RBP24.45■■□□□ 1.51
DDX39A-207ENST00000588542 ATRNL1Q5VV63 1379 aa24.45■■□□□ 1.5
DDX39A-207ENST00000588542 DDTLA6NHG4 134 aaPredicted RBP24.45■■□□□ 1.5
DDX39A-207ENST00000588542 PAXIP1Q6ZW49 1069 aaPredicted RBP24.45■■□□□ 1.5
DDX39A-207ENST00000588542 TGFBRAP1Q8WUH2 860 aa24.45■■□□□ 1.5
DDX39A-207ENST00000588542 NAV1Q8NEY1 1877 aa24.45■■□□□ 1.5
DDX39A-207ENST00000588542 DDX60LQ5H9U9 1706 aaKnown RBP24.44■■□□□ 1.5
DDX39A-207ENST00000588542 FAM155AB1AL88 458 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-207ENST00000588542 PDE4AP27815 886 aa24.44■■□□□ 1.5
DDX39A-207ENST00000588542 UBE3CQ15386 1083 aa24.44■■□□□ 1.5
DDX39A-207ENST00000588542 CERS3Q8IU89 383 aa24.44■■□□□ 1.5
DDX39A-207ENST00000588542 JMYQ8N9B5 988 aa24.44■■□□□ 1.5
DDX39A-207ENST00000588542 OSBPL5Q9H0X9 879 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-207ENST00000588542 OSBPL3Q9H4L5 887 aa24.44■■□□□ 1.5
DDX39A-207ENST00000588542 FLT1P17948 1338 aa24.43■■□□□ 1.5
DDX39A-207ENST00000588542 MAGEB6P1A0A0J9YX57 407 aa24.43■■□□□ 1.5
DDX39A-207ENST00000588542 ECE1P42892 770 aa24.43■■□□□ 1.5
DDX39A-207ENST00000588542 ZNF157P51786 506 aaPredicted RBP24.43■■□□□ 1.5
DDX39A-207ENST00000588542 ZSCAN25Q6NSZ9 544 aa24.43■■□□□ 1.5
DDX39A-207ENST00000588542 HOOK2Q96ED9 719 aa24.43■■□□□ 1.5
DDX39A-207ENST00000588542 LAMB1P07942 1786 aa24.42■■□□□ 1.5
DDX39A-207ENST00000588542 IREB2P48200 963 aaKnown RBP24.42■■□□□ 1.5
DDX39A-207ENST00000588542 GRM1Q13255 1194 aa24.42■■□□□ 1.5
DDX39A-207ENST00000588542 MIGA2Q7L4E1 593 aa24.42■■□□□ 1.5
DDX39A-207ENST00000588542 RASAL3Q86YV0 1011 aa24.42■■□□□ 1.5
DDX39A-207ENST00000588542 MAPKAPK5Q8IW41 473 aa24.42■■□□□ 1.5
DDX39A-207ENST00000588542 CSRNP1Q96S65 589 aa24.42■■□□□ 1.5
DDX39A-207ENST00000588542 AOC2O75106 756 aa24.41■■□□□ 1.5
DDX39A-207ENST00000588542 SLC10A3P09131 477 aa24.41■■□□□ 1.5
DDX39A-207ENST00000588542 ZSCAN29Q8IWY8 852 aaPredicted RBP24.41■■□□□ 1.5
DDX39A-207ENST00000588542 LCORLQ8N3X6 602 aa24.41■■□□□ 1.5
DDX39A-207ENST00000588542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.41■■□□□ 1.5
DDX39A-207ENST00000588542 CLMNQ96JQ2 1002 aa24.41■■□□□ 1.5
DDX39A-207ENST00000588542 BAZ2AQ9UIF9 1905 aaKnown RBP24.41■■□□□ 1.5
DDX39A-207ENST00000588542 UNCXA6NJT0 531 aa24.4■■□□□ 1.5
DDX39A-207ENST00000588542 RNF113AO15541 343 aaKnown RBP24.4■■□□□ 1.5
DDX39A-207ENST00000588542 NEFLP07196 543 aa24.4■■□□□ 1.5
DDX39A-207ENST00000588542 SLURP2P0DP57 97 aa24.4■■□□□ 1.5
DDX39A-207ENST00000588542 MAP3K10Q02779 954 aa24.4■■□□□ 1.5
DDX39A-207ENST00000588542 DCAF15Q66K64 600 aa24.4■■□□□ 1.5
DDX39A-207ENST00000588542 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.4■■□□□ 1.5
DDX39A-207ENST00000588542 CCDC102AQ96A19 550 aa24.4■■□□□ 1.5
DDX39A-207ENST00000588542 PUS7LQ9H0K6 701 aaKnown RBP24.4■■□□□ 1.5
DDX39A-207ENST00000588542 ANKRD13AQ8IZ07 590 aa24.39■■□□□ 1.49
DDX39A-207ENST00000588542 ZIC5Q96T25 663 aa24.39■■□□□ 1.49
DDX39A-207ENST00000588542 ZNF341Q9BYN7 854 aa24.39■■□□□ 1.49
DDX39A-207ENST00000588542 ARMT1Q9H993 441 aa24.39■■□□□ 1.49
DDX39A-207ENST00000588542 MBD4O95243 580 aa24.38■■□□□ 1.49
DDX39A-207ENST00000588542 ZFYP08048 801 aaPredicted RBP24.38■■□□□ 1.49
DDX39A-207ENST00000588542 MAP3K9P80192 1104 aa24.38■■□□□ 1.49
DDX39A-207ENST00000588542 OSBP2Q969R2 916 aa24.38■■□□□ 1.49
DDX39A-207ENST00000588542 EVI5LQ96CN4 794 aa24.38■■□□□ 1.49
DDX39A-207ENST00000588542 FSD1Q9BTV5 496 aa24.38■■□□□ 1.49
DDX39A-207ENST00000588542 ZNF112Q9UJU3 913 aa24.38■■□□□ 1.49
DDX39A-207ENST00000588542 USP5P45974 858 aa24.37■■□□□ 1.49
DDX39A-207ENST00000588542 APPBP2Q92624 585 aa24.37■■□□□ 1.49
DDX39A-207ENST00000588542 WRNIP1Q96S55 665 aa24.37■■□□□ 1.49
DDX39A-207ENST00000588542 CRNKL1Q9BZJ0 848 aaKnown RBP24.37■■□□□ 1.49
DDX39A-207ENST00000588542 ATAD5Q96QE3 1844 aa24.37■■□□□ 1.49
DDX39A-207ENST00000588542 MAP2K2P36507 400 aa24.36■■□□□ 1.49
DDX39A-207ENST00000588542 NOGQ13253 232 aa24.36■■□□□ 1.49
DDX39A-207ENST00000588542 VGLL4Q14135 290 aa24.36■■□□□ 1.49
DDX39A-207ENST00000588542 CENPQQ7L2Z9 268 aaPredicted RBP24.36■■□□□ 1.49
DDX39A-207ENST00000588542 SLC10A4Q96EP9 437 aa24.36■■□□□ 1.49
DDX39A-207ENST00000588542 DHX36Q9H2U1 1008 aaKnown RBP24.36■■□□□ 1.49
DDX39A-207ENST00000588542 SAP30BPQ9UHR5 308 aaKnown RBP24.36■■□□□ 1.49
DDX39A-207ENST00000588542 PALD1Q9ULE6 856 aa24.36■■□□□ 1.49
DDX39A-207ENST00000588542 DOCK1Q14185 1865 aa24.36■■□□□ 1.49
DDX39A-207ENST00000588542 PHF20L1A8MW92 1017 aa24.35■■□□□ 1.49
DDX39A-207ENST00000588542 PRKAB2O43741 272 aa24.35■■□□□ 1.49
DDX39A-207ENST00000588542 TBC1D12O60347 775 aa24.35■■□□□ 1.49
DDX39A-207ENST00000588542 INPP5BP32019 993 aa24.35■■□□□ 1.49
DDX39A-207ENST00000588542 LRRFIP1Q32MZ4 808 aaKnown RBP24.35■■□□□ 1.49
DDX39A-207ENST00000588542 SDR42E1Q8WUS8 393 aa24.35■■□□□ 1.49
DDX39A-207ENST00000588542 ZKSCAN4Q969J2 545 aaPredicted RBP24.35■■□□□ 1.49
DDX39A-207ENST00000588542 AIDAQ96BJ3 306 aa24.34■■□□□ 1.49
DDX39A-207ENST00000588542 ELP3Q9H9T3 547 aa24.34■■□□□ 1.49
DDX39A-207ENST00000588542 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.34■■□□□ 1.49
DDX39A-207ENST00000588542 PI4KBQ9UBF8 816 aa24.34■■□□□ 1.49
DDX39A-207ENST00000588542 SNCAIPQ9Y6H5 919 aa24.34■■□□□ 1.49
DDX39A-207ENST00000588542 PHIPQ8WWQ0 1821 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 FAM196BA6NMK8 535 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 M0R2C6 588 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 GJA5P36382 358 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 ZMYM1Q5SVZ6 1142 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 SPRYD7Q5W111 196 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 METTL16Q86W50 562 aaKnown RBP24.33■■□□□ 1.49
DDX39A-207ENST00000588542 WNK4Q96J92 1243 aa24.33■■□□□ 1.49
DDX39A-207ENST00000588542 STRBPQ96SI9 672 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms