RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 ANKRD23Q86SG2 305 aa20.89■□□□□ 0.93
TMED1-203ENST00000588259 IDI2Q9BXS1 227 aa20.89■□□□□ 0.93
TMED1-203ENST00000588259 KCNH4Q9UQ05 1017 aa20.89■□□□□ 0.93
TMED1-203ENST00000588259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.89■□□□□ 0.93
TMED1-203ENST00000588259 DOCK1Q14185 1865 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 EN2P19622 333 aaPredicted RBP20.88■□□□□ 0.93
TMED1-203ENST00000588259 HNRNPUQ00839 825 aaKnown RBP eCLIP20.88■□□□□ 0.93
TMED1-203ENST00000588259 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 SCYL3Q8IZE3 742 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 SPATA5Q8NB90 893 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 ZNF333Q96JL9 665 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 RAI14Q9P0K7 980 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 HMG20BQ9P0W2 317 aa20.88■□□□□ 0.93
TMED1-203ENST00000588259 GSTO1P78417 241 aa20.87■□□□□ 0.93
TMED1-203ENST00000588259 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
TMED1-203ENST00000588259 TMEM57Q8N5G2 664 aa20.87■□□□□ 0.93
TMED1-203ENST00000588259 SH3TC2Q8TF17 1288 aa20.87■□□□□ 0.93
TMED1-203ENST00000588259 PARK7Q99497 189 aaKnown RBP20.87■□□□□ 0.93
TMED1-203ENST00000588259 DDX4Q9NQI0 724 aaKnown RBP20.87■□□□□ 0.93
TMED1-203ENST00000588259 ZHX2Q9Y6X8 837 aa20.87■□□□□ 0.93
TMED1-203ENST00000588259 ATRNL1Q5VV63 1379 aa20.86■□□□□ 0.93
TMED1-203ENST00000588259 DDTLA6NHG4 134 aaPredicted RBP20.86■□□□□ 0.93
TMED1-203ENST00000588259 ZBTB22O15209 634 aa20.86■□□□□ 0.93
TMED1-203ENST00000588259 GADL1Q6ZQY3 521 aa20.86■□□□□ 0.93
TMED1-203ENST00000588259 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
TMED1-203ENST00000588259 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
TMED1-203ENST00000588259 FAM163AQ96GL9 167 aaPredicted RBP20.86■□□□□ 0.93
TMED1-203ENST00000588259 PHF20L1A8MW92 1017 aa20.85■□□□□ 0.93
TMED1-203ENST00000588259 CXCL11O14625 94 aa20.85■□□□□ 0.93
TMED1-203ENST00000588259 FMNL1O95466 1100 aaPredicted RBP20.85■□□□□ 0.93
TMED1-203ENST00000588259 LDHCP07864 332 aa20.85■□□□□ 0.93
TMED1-203ENST00000588259 PSMC4P43686 418 aa20.85■□□□□ 0.93
TMED1-203ENST00000588259 C17orf99Q6UX52 265 aa20.85■□□□□ 0.93
TMED1-203ENST00000588259 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
TMED1-203ENST00000588259 GPR75-ASB3A0A0A6YYF3 556 aa20.84■□□□□ 0.93
TMED1-203ENST00000588259 GNRH1P01148 92 aa20.84■□□□□ 0.93
TMED1-203ENST00000588259 UQCRFS1P1P0C7P4 283 aa20.84■□□□□ 0.93
TMED1-203ENST00000588259 SLURP2P0DP57 97 aa20.84■□□□□ 0.93
TMED1-203ENST00000588259 PTPRAP18433 802 aa20.84■□□□□ 0.93
TMED1-203ENST00000588259 NOL10Q9BSC4 688 aaKnown RBP20.84■□□□□ 0.93
TMED1-203ENST00000588259 PTPRFP10586 1907 aa20.84■□□□□ 0.93
TMED1-203ENST00000588259 TRIM75PA6NK02 468 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 FAM196BA6NMK8 535 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 CYP2C8P10632 490 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 ARID4AP29374 1257 aaPredicted RBP20.83■□□□□ 0.93
TMED1-203ENST00000588259 MOGSQ13724 837 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 TTC39AQ5SRH9 613 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 FASTKD5Q7L8L6 764 aaKnown RBP20.83■□□□□ 0.93
TMED1-203ENST00000588259 ITPRIPQ8IWB1 547 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 TRIM47Q96LD4 638 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 C1orf115Q9H7X2 142 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 SNRKQ9NRH2 765 aa20.83■□□□□ 0.93
TMED1-203ENST00000588259 HOXD10P28358 340 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 MCAMP43121 646 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 PRMT2P55345 433 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 RHBDL3P58872 404 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 RAET1EQ8TD07 263 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 ZNF384Q8TF68 577 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 NSUN4Q96CB9 384 aaKnown RBP20.82■□□□□ 0.92
TMED1-203ENST00000588259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
TMED1-203ENST00000588259 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.82■□□□□ 0.92
TMED1-203ENST00000588259 MAST2Q6P0Q8 1798 aa20.82■□□□□ 0.92
TMED1-203ENST00000588259 MGAMO43451 1857 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 ADGRA2Q96PE1 1338 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 A0A0G2JLL6 359 aaPredicted RBP20.81■□□□□ 0.92
TMED1-203ENST00000588259 CTNND1O60716 968 aaKnown RBP20.81■□□□□ 0.92
TMED1-203ENST00000588259 GPAT2Q6NUI2 795 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 PRRT2Q7Z6L0 340 aaPredicted RBP20.81■□□□□ 0.92
TMED1-203ENST00000588259 CCDC84Q86UT8 332 aaPredicted RBP20.81■□□□□ 0.92
TMED1-203ENST00000588259 TEX11Q8IYF3 940 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 SRRDQ9UH36 339 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 PHIPQ8WWQ0 1821 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 ATAD5Q96QE3 1844 aa20.81■□□□□ 0.92
TMED1-203ENST00000588259 MYPNQ86TC9 1320 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 SURF6O75683 361 aaKnown RBP20.8■□□□□ 0.92
TMED1-203ENST00000588259 OSBPP22059 807 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 CTGFP29279 349 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 FCGRTP55899 365 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 TNNI3KQ59H18 835 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 CCDC158Q5M9N0 1113 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 SMCR8Q8TEV9 937 aaPredicted RBP20.8■□□□□ 0.92
TMED1-203ENST00000588259 BIN2Q9UBW5 565 aaPredicted RBP20.8■□□□□ 0.92
TMED1-203ENST00000588259 AFG3L2Q9Y4W6 797 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 FPGT-TNNI3KV9GXZ4 949 aa20.8■□□□□ 0.92
TMED1-203ENST00000588259 MIER1Q8N108 512 aa20.79■□□□□ 0.92
TMED1-203ENST00000588259 DBNDD2Q9BQY9 259 aa20.79■□□□□ 0.92
TMED1-203ENST00000588259 MKI67P46013 3256 aaKnown RBP20.79■□□□□ 0.92
TMED1-203ENST00000588259 MAP4K4O95819 1239 aaPredicted RBP20.78■□□□□ 0.92
TMED1-203ENST00000588259 MAP3K10Q02779 954 aa20.78■□□□□ 0.92
TMED1-203ENST00000588259 POLA2Q14181 598 aa20.78■□□□□ 0.92
TMED1-203ENST00000588259 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
TMED1-203ENST00000588259 SH3RF3Q8TEJ3 882 aaPredicted RBP20.78■□□□□ 0.92
TMED1-203ENST00000588259 OSBPL5Q9H0X9 879 aaPredicted RBP20.78■□□□□ 0.92
TMED1-203ENST00000588259 MYO5AQ9Y4I1 1855 aaKnown RBP20.77■□□□□ 0.92
TMED1-203ENST00000588259 NPM3O75607 178 aaKnown RBP20.77■□□□□ 0.92
TMED1-203ENST00000588259 BCRP11274 1271 aa20.77■□□□□ 0.92
TMED1-203ENST00000588259 GRK4P32298 578 aa20.77■□□□□ 0.92
TMED1-203ENST00000588259 ATP8B2P98198 1209 aa20.77■□□□□ 0.92
TMED1-203ENST00000588259 SSH3Q8TE77 659 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms