RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 C19orf57Q0VDD7 668 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 LRRFIP1Q32MZ4 808 aaKnown RBP7.89□□□□□ -1.15
TUBD1-208ENST00000588009 TMEM151AQ8N4L1 468 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 SVOPQ8N4V2 548 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 C19orf47Q8N9M1 422 aaKnown RBP7.89□□□□□ -1.15
TUBD1-208ENST00000588009 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 WNT8BQ93098 351 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 GPATCH3Q96I76 525 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 KANSL2Q9H9L4 492 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 PCDHA4Q9UN74 947 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 ADAMTS8Q9UP79 889 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 STARD13Q9Y3M8 1113 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 PPME1Q9Y570 386 aa7.89□□□□□ -1.15
TUBD1-208ENST00000588009 PRR36Q9H6K5 1346 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 CYP11A1P05108 521 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 SLURP2P0DP57 97 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 KRT76Q01546 638 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 POU4F3Q15319 338 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 PTPROQ16827 1216 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 ANTXR1Q9H6X2 564 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 MBIPQ9NS73 344 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 KRT82Q9NSB4 513 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 SNCAIPQ9Y6H5 919 aa7.88□□□□□ -1.15
TUBD1-208ENST00000588009 A0A1W2PQH9 124 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 LINC01387J3KSC0 135 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 HTR3BO95264 441 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 GJB6O95452 261 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 INPP5AQ14642 412 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 WIPI1Q5MNZ9 446 aaPredicted RBP7.87□□□□□ -1.15
TUBD1-208ENST00000588009 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
TUBD1-208ENST00000588009 FAM117BQ6P1L5 589 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 TXNDC11Q6PKC3 985 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 C20orf204Q6ZNR8 217 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 ACSBG1Q96GR2 724 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 TM9SF2Q99805 663 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 CORO1BQ9BR76 489 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 CCDC86Q9H6F5 360 aaKnown RBP7.87□□□□□ -1.15
TUBD1-208ENST00000588009 JPH1Q9HDC5 661 aaPredicted RBP7.87□□□□□ -1.15
TUBD1-208ENST00000588009 OSGEPQ9NPF4 335 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 FANCLQ9NW38 375 aa7.87□□□□□ -1.15
TUBD1-208ENST00000588009 MEIS3P2A8K0S8 358 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 CDC45O75419 566 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 DDAH1O94760 285 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 GDF11O95390 407 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 ECEL1O95672 775 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 MAOBP27338 520 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 RASSF7Q02833 373 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 LRFN4Q6PJG9 635 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 HDXQ7Z353 690 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 TTC6Q86TZ1 520 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 PLPPR2Q96GM1 343 aa7.86□□□□□ -1.15
TUBD1-208ENST00000588009 ESYT3A0FGR9 886 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 FSCN2O14926 492 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 GUCY2CP25092 1073 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 MLECQ14165 292 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 ZNF385CQ66K41 422 aaPredicted RBP7.85□□□□□ -1.15
TUBD1-208ENST00000588009 GOLGA6L1Q8N7Z2 621 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 TMEM40Q8WWA1 233 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 APPBP2Q92624 585 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 BRINP2Q9C0B6 783 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 ENAMQ9NRM1 1142 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
TUBD1-208ENST00000588009 IGF1RP08069 1367 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 ZNF862O60290 1169 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 ALBP02768 609 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 IBSPP21815 317 aaPredicted RBP7.84□□□□□ -1.15
TUBD1-208ENST00000588009 AFF1P51825 1210 aaKnown RBP7.84□□□□□ -1.15
TUBD1-208ENST00000588009 MTERF2Q49AM1 385 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 C6orf15Q6UXA7 325 aaPredicted RBP7.84□□□□□ -1.15
TUBD1-208ENST00000588009 SLCO4C1Q6ZQN7 724 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 HOMER1Q86YM7 354 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 FAM178BQ8IXR5 827 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 TAB3Q8N5C8 712 aaPredicted RBP7.84□□□□□ -1.15
TUBD1-208ENST00000588009 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 SCARF2Q96GP6 870 aaPredicted RBP7.84□□□□□ -1.15
TUBD1-208ENST00000588009 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 GDF2Q9UK05 429 aaPredicted RBP7.84□□□□□ -1.15
TUBD1-208ENST00000588009 TACC3Q9Y6A5 838 aa7.84□□□□□ -1.15
TUBD1-208ENST00000588009 SLC22A31A6NKX4 558 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 B2RBV5 119 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 CTSBP07858 339 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 EPXP11678 715 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 LIG1P18858 919 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 IGBP1P78318 339 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 SRSF11Q05519 484 aaKnown RBP7.83□□□□□ -1.16
TUBD1-208ENST00000588009 SQSTM1Q13501 440 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 RNFT1Q5M7Z0 435 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 INTS3Q68E01 1043 aaKnown RBP7.83□□□□□ -1.16
TUBD1-208ENST00000588009 CYFIP1Q7L576 1253 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 FILIP1Q7Z7B0 1213 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 ZCRB1Q8TBF4 217 aaKnown RBP7.83□□□□□ -1.16
TUBD1-208ENST00000588009 ELMO3Q96BJ8 720 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 SLKQ9H2G2 1235 aaPredicted RBP7.83□□□□□ -1.16
TUBD1-208ENST00000588009 IFT57Q9NWB7 429 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 TMEM260Q9NX78 707 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 GMIPQ9P107 970 aa7.83□□□□□ -1.16
TUBD1-208ENST00000588009 KDM2BQ8NHM5 1336 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms