RNA–Protein interactions for RNA: ENST00000587449.1

CELF4-206, Transcript of CUGBP Elav-like family member 4, human

TSL 3

Gene CELF4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-206	ENST00000587449	TRIM32	Q13049	653 aa		13.95	□□□□□ -0.18
CELF4-206	ENST00000587449	SCYL3	Q8IZE3	742 aa		13.95	□□□□□ -0.18
CELF4-206	ENST00000587449	GJD2	Q9UKL4	321 aa		13.95	□□□□□ -0.18
CELF4-206	ENST00000587449	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.95	□□□□□ -0.18
CELF4-206	ENST00000587449	PHF20L1	A8MW92	1017 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	FLII	Q13045	1269 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	EPHA10	Q5JZY3	1008 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	MAP3K21	Q5TCX8	1036 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	GADL1	Q6ZQY3	521 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	VPS37D	Q86XT2	251 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	PICK1	Q9NRD5	415 aa		13.94	□□□□□ -0.18
CELF4-206	ENST00000587449	FRAT2	O75474	233 aa	Predicted RBP	13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	PLA2G5	P39877	138 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	TCP10	Q12799	353 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	NFIA	Q12857	509 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	LRRC26	Q2I0M4	334 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	SEMA6B	Q9H3T3	888 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	AGTPBP1	Q9UPW5	1226 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449	ATRNL1	Q5VV63	1379 aa		13.93	□□□□□ -0.18
CELF4-206	ENST00000587449		A0A1B0GUL6	1792 aa		13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	TNFRSF10A	O00220	468 aa		13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	FKBP5	Q13451	457 aa	Predicted RBP	13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	CAVIN4	Q5BKX8	364 aa		13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	CDC42EP5	Q6NZY7	148 aa		13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	PUS3	Q9BZE2	481 aa	Known RBP	13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	FAM198A	Q9UFP1	575 aa		13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	RAPGEFL1	Q9UHV5	662 aa		13.92	□□□□□ -0.18
CELF4-206	ENST00000587449	APAF1	O14727	1248 aa		13.91	□□□□□ -0.18
CELF4-206	ENST00000587449	PRKAR2A	P13861	404 aa	Known RBP	13.91	□□□□□ -0.18
CELF4-206	ENST00000587449	TRIB2	Q92519	343 aa		13.91	□□□□□ -0.18
CELF4-206	ENST00000587449	PNMA3	Q9UL41	463 aa		13.91	□□□□□ -0.18
CELF4-206	ENST00000587449	DAGLA	Q9Y4D2	1042 aa		13.91	□□□□□ -0.18
CELF4-206	ENST00000587449	MROH5	Q6ZUA9	1318 aa		13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	TRIM75P	A6NK02	468 aa		13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	GCLC	P48506	637 aa	Predicted RBP	13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	MAP3K10	Q02779	954 aa		13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	TJAP1	Q5JTD0	557 aa		13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	MYLIP	Q8WY64	445 aa		13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	MGAM	O43451	1857 aa		13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	DDX60L	Q5H9U9	1706 aa	Known RBP	13.9	□□□□□ -0.18
CELF4-206	ENST00000587449	DNAH12	Q6ZR08	3092 aa		13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	CTNND1	O60716	968 aa	Known RBP	13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	TWISTNB	Q3B726	338 aa	Predicted RBP	13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	TREML2	Q5T2D2	321 aa		13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	BEND3	Q5T5X7	828 aa		13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	LHX8	Q68G74	356 aa		13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	ZFPM1	Q8IX07	1006 aa		13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	TSR2	Q969E8	191 aa	Known RBP	13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	TTYH1	Q9H313	450 aa	Predicted RBP	13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.89	□□□□□ -0.19
CELF4-206	ENST00000587449	XRCC5	P13010	732 aa	Known RBP	13.88	□□□□□ -0.19
CELF4-206	ENST00000587449	FOSL2	P15408	326 aa		13.88	□□□□□ -0.19
CELF4-206	ENST00000587449	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.88	□□□□□ -0.19
CELF4-206	ENST00000587449	FAM122A	Q96E09	287 aa		13.88	□□□□□ -0.19
CELF4-206	ENST00000587449	LRRFIP2	Q9Y608	721 aa	Known RBP	13.88	□□□□□ -0.19
CELF4-206	ENST00000587449	GRM8	O00222	908 aa		13.87	□□□□□ -0.19
CELF4-206	ENST00000587449	SMAD3	P84022	425 aa	Known RBP	13.87	□□□□□ -0.19
CELF4-206	ENST00000587449	DIXDC1	Q155Q3	683 aa		13.87	□□□□□ -0.19
CELF4-206	ENST00000587449	VGLL2	Q8N8G2	317 aa		13.87	□□□□□ -0.19
CELF4-206	ENST00000587449	USP40	Q9NVE5	1235 aa		13.87	□□□□□ -0.19
CELF4-206	ENST00000587449	KIF16B	Q96L93	1317 aa		13.87	□□□□□ -0.19
CELF4-206	ENST00000587449	ENTPD3	O75355	529 aa		13.86	□□□□□ -0.19
CELF4-206	ENST00000587449	CYP2B6	P20813	491 aa		13.86	□□□□□ -0.19
CELF4-206	ENST00000587449	HOXD11	P31277	338 aa	Predicted RBP	13.86	□□□□□ -0.19
CELF4-206	ENST00000587449	CACNB2	Q08289	660 aa	Predicted RBP	13.86	□□□□□ -0.19
CELF4-206	ENST00000587449	TRMT44	Q8IYL2	757 aa	Known RBP	13.86	□□□□□ -0.19
CELF4-206	ENST00000587449	WDR66	Q8TBY9	1149 aa		13.86	□□□□□ -0.19
CELF4-206	ENST00000587449	MORF4L1	Q9UBU8	362 aa		13.86	□□□□□ -0.19
CELF4-206	ENST00000587449		F6X3S4	739 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	PDE8B	O95263	885 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	SHH	Q15465	462 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	METTL24	Q5JXM2	366 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	SH3BP5L	Q7L8J4	393 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	SOCS4	Q8WXH5	440 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	IDI2	Q9BXS1	227 aa		13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.85	□□□□□ -0.19
CELF4-206	ENST00000587449	TMEM265	A0A087WTH1	108 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	ZKSCAN1	P17029	563 aa	Predicted RBP	13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	RGS3	P49796	1198 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	LRRC24	Q50LG9	513 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	C9orf50	Q5SZB4	431 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	CCDC84	Q86UT8	332 aa	Predicted RBP	13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	KAZALD1	Q96I82	304 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	NUDT12	Q9BQG2	462 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	PRKAG2	Q9UGJ0	569 aa		13.84	□□□□□ -0.19
CELF4-206	ENST00000587449	FGFR2	P21802	821 aa		13.83	□□□□□ -0.2
CELF4-206	ENST00000587449	CCND3	P30281	292 aa	Predicted RBP	13.83	□□□□□ -0.2
CELF4-206	ENST00000587449	USP38	Q8NB14	1042 aa		13.83	□□□□□ -0.2
CELF4-206	ENST00000587449	USP6NL	Q92738	828 aa		13.83	□□□□□ -0.2
CELF4-206	ENST00000587449	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.83	□□□□□ -0.2
CELF4-206	ENST00000587449	RFX7	Q2KHR2	1363 aa		13.83	□□□□□ -0.2
CELF4-206	ENST00000587449	BDP1	A6H8Y1	2624 aa		13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	DDTL	A6NHG4	134 aa	Predicted RBP	13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	IFIT1	P09914	478 aa	Known RBP	13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	SLURP2	P0DP57	97 aa		13.82	□□□□□ -0.2
CELF4-206	ENST00000587449	PRDX5	P30044	214 aa		13.82	□□□□□ -0.2

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